Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC11.99□□□□□ -0.49
PDE6DO43924 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.99□□□□□ -0.49
PDE6DO43924 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
PDE6DO43924 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.99□□□□□ -0.49
PDE6DO43924 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.99□□□□□ -0.49
PDE6DO43924 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.99□□□□□ -0.49
PDE6DO43924 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
PDE6DO43924 AP000845.1-201ENST00000581677 2131 ntBASIC11.99□□□□□ -0.49
PDE6DO43924 AC023090.2-201ENST00000625182 2110 ntBASIC11.99□□□□□ -0.49
PDE6DO43924 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.99□□□□□ -0.49
PDE6DO43924 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PDE6DO43924 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
PDE6DO43924 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PDE6DO43924 AC027612.1-201ENST00000445234 2395 ntBASIC11.99□□□□□ -0.49
PDE6DO43924 PPT1-213ENST00000641319 2388 ntBASIC11.99□□□□□ -0.49
PDE6DO43924 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
PDE6DO43924 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
PDE6DO43924 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PDE6DO43924 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PDE6DO43924 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
PDE6DO43924 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PDE6DO43924 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PDE6DO43924 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.99□□□□□ -0.49
PDE6DO43924 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
PDE6DO43924 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
PDE6DO43924 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
PDE6DO43924 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
PDE6DO43924 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC11.98□□□□□ -0.49
PDE6DO43924 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.98□□□□□ -0.49
PDE6DO43924 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
PDE6DO43924 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
PDE6DO43924 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
PDE6DO43924 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
PDE6DO43924 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.98□□□□□ -0.49
PDE6DO43924 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.98□□□□□ -0.49
PDE6DO43924 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.98□□□□□ -0.49
PDE6DO43924 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC11.98□□□□□ -0.49
PDE6DO43924 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
PDE6DO43924 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
PDE6DO43924 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.98□□□□□ -0.49
PDE6DO43924 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
PDE6DO43924 MRPL20P1-201ENST00000400819 433 ntBASIC11.98□□□□□ -0.49
PDE6DO43924 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
PDE6DO43924 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC11.98□□□□□ -0.49
PDE6DO43924 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC11.98□□□□□ -0.49
PDE6DO43924 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.98□□□□□ -0.49
PDE6DO43924 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
PDE6DO43924 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC11.98□□□□□ -0.49
PDE6DO43924 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC11.98□□□□□ -0.49
PDE6DO43924 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
PDE6DO43924 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
PDE6DO43924 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
PDE6DO43924 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
PDE6DO43924 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
PDE6DO43924 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PDE6DO43924 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
PDE6DO43924 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.97□□□□□ -0.49
PDE6DO43924 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC11.97□□□□□ -0.49
PDE6DO43924 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6DO43924 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6DO43924 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6DO43924 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
PDE6DO43924 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC11.97□□□□□ -0.49
PDE6DO43924 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6DO43924 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6DO43924 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6DO43924 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6DO43924 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6DO43924 MED25-212ENST00000618715 1467 ntTSL 5 BASIC11.97□□□□□ -0.49
PDE6DO43924 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
PDE6DO43924 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
PDE6DO43924 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
PDE6DO43924 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
PDE6DO43924 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.97□□□□□ -0.49
PDE6DO43924 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms