Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
ACTN4O43707 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.29■□□□□ 0.36
ACTN4O43707 AC140479.7-201ENST00000636301 2332 ntBASIC17.29■□□□□ 0.36
ACTN4O43707 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ACTN4O43707 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ACTN4O43707 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ACTN4O43707 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ACTN4O43707 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ACTN4O43707 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ACTN4O43707 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ACTN4O43707 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ACTN4O43707 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ACTN4O43707 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ACTN4O43707 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.28■□□□□ 0.36
ACTN4O43707 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ACTN4O43707 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
ACTN4O43707 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ACTN4O43707 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ACTN4O43707 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ACTN4O43707 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.28■□□□□ 0.36
ACTN4O43707 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ACTN4O43707 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.28■□□□□ 0.36
ACTN4O43707 AC241585.1-201ENST00000433527 519 ntBASIC17.28■□□□□ 0.36
ACTN4O43707 GAPDHP40-201ENST00000505218 1006 ntBASIC17.28■□□□□ 0.36
ACTN4O43707 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.28■□□□□ 0.36
ACTN4O43707 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.28■□□□□ 0.36
ACTN4O43707 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.28■□□□□ 0.36
ACTN4O43707 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.28■□□□□ 0.36
ACTN4O43707 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.28■□□□□ 0.36
ACTN4O43707 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ACTN4O43707 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.28■□□□□ 0.36
ACTN4O43707 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
ACTN4O43707 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ACTN4O43707 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ACTN4O43707 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ACTN4O43707 AC005912.2-201ENST00000619492 2400 ntBASIC17.28■□□□□ 0.36
ACTN4O43707 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ACTN4O43707 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ACTN4O43707 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ACTN4O43707 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ACTN4O43707 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ACTN4O43707 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.27■□□□□ 0.36
ACTN4O43707 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ACTN4O43707 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.27■□□□□ 0.36
ACTN4O43707 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ACTN4O43707 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ACTN4O43707 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ACTN4O43707 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
ACTN4O43707 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.27■□□□□ 0.36
ACTN4O43707 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ACTN4O43707 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.27■□□□□ 0.36
ACTN4O43707 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ACTN4O43707 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.27■□□□□ 0.36
ACTN4O43707 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ACTN4O43707 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
ACTN4O43707 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ACTN4O43707 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.27■□□□□ 0.36
ACTN4O43707 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.27■□□□□ 0.36
ACTN4O43707 METTL21AP1-201ENST00000438852 635 ntBASIC17.27■□□□□ 0.36
ACTN4O43707 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.27■□□□□ 0.36
ACTN4O43707 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ACTN4O43707 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.27■□□□□ 0.36
ACTN4O43707 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.27■□□□□ 0.36
ACTN4O43707 AC008738.7-201ENST00000609744 511 ntBASIC17.27■□□□□ 0.36
ACTN4O43707 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ACTN4O43707 AC004790.1-201ENST00000612686 536 ntBASIC17.27■□□□□ 0.36
ACTN4O43707 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
ACTN4O43707 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ACTN4O43707 AC139530.3-201ENST00000620344 690 ntBASIC17.27■□□□□ 0.36
ACTN4O43707 AC004840.1-201ENST00000636359 365 ntBASIC17.27■□□□□ 0.36
ACTN4O43707 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.27■□□□□ 0.36
ACTN4O43707 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ACTN4O43707 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.27■□□□□ 0.35
ACTN4O43707 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ACTN4O43707 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ACTN4O43707 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ACTN4O43707 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ACTN4O43707 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.27■□□□□ 0.35
ACTN4O43707 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ACTN4O43707 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
ACTN4O43707 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
ACTN4O43707 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
ACTN4O43707 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACTN4O43707 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACTN4O43707 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACTN4O43707 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ACTN4O43707 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ACTN4O43707 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACTN4O43707 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACTN4O43707 KRT18P28-201ENST00000453838 1332 ntBASIC17.26■□□□□ 0.35
ACTN4O43707 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ACTN4O43707 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACTN4O43707 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACTN4O43707 CLK3P2-201ENST00000427566 1453 ntBASIC17.26■□□□□ 0.35
ACTN4O43707 AC026748.1-201ENST00000624349 3251 ntBASIC17.26■□□□□ 0.35
ACTN4O43707 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ACTN4O43707 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ACTN4O43707 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACTN4O43707 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
ACTN4O43707 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms