Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CACNB4O00305 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CACNB4O00305 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CACNB4O00305 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
CACNB4O00305 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CACNB4O00305 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.2■□□□□ 0.02
CACNB4O00305 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CACNB4O00305 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.2■□□□□ 0.02
CACNB4O00305 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CACNB4O00305 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CACNB4O00305 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CACNB4O00305 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CACNB4O00305 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CACNB4O00305 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CACNB4O00305 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CACNB4O00305 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.19■□□□□ 0.02
CACNB4O00305 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CACNB4O00305 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CACNB4O00305 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CACNB4O00305 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CACNB4O00305 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.19■□□□□ 0.02
CACNB4O00305 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.19■□□□□ 0.02
CACNB4O00305 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CACNB4O00305 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.19■□□□□ 0.02
CACNB4O00305 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CACNB4O00305 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.19■□□□□ 0.02
CACNB4O00305 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CACNB4O00305 KLF2P2-201ENST00000416807 1039 ntBASIC15.19■□□□□ 0.02
CACNB4O00305 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CACNB4O00305 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.19■□□□□ 0.02
CACNB4O00305 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.19■□□□□ 0.02
CACNB4O00305 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.19■□□□□ 0.02
CACNB4O00305 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.19■□□□□ 0.02
CACNB4O00305 AP000812.2-201ENST00000538934 718 ntBASIC15.19■□□□□ 0.02
CACNB4O00305 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CACNB4O00305 AC079316.1-201ENST00000548397 411 ntBASIC15.19■□□□□ 0.02
CACNB4O00305 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
CACNB4O00305 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CACNB4O00305 MIR4259-201ENST00000584466 101 ntBASIC15.19■□□□□ 0.02
CACNB4O00305 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.19■□□□□ 0.02
CACNB4O00305 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CACNB4O00305 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CACNB4O00305 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.19■□□□□ 0.02
CACNB4O00305 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CACNB4O00305 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CACNB4O00305 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.19■□□□□ 0.02
CACNB4O00305 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CACNB4O00305 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CACNB4O00305 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CACNB4O00305 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CACNB4O00305 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CACNB4O00305 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CACNB4O00305 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CACNB4O00305 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CACNB4O00305 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CACNB4O00305 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CACNB4O00305 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CACNB4O00305 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CACNB4O00305 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
CACNB4O00305 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CACNB4O00305 AC093525.8-201ENST00000624099 1342 ntBASIC15.18■□□□□ 0.02
CACNB4O00305 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CACNB4O00305 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CACNB4O00305 AC105250.1-201ENST00000509378 2057 ntBASIC15.18■□□□□ 0.02
CACNB4O00305 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CACNB4O00305 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CACNB4O00305 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.18■□□□□ 0.02
CACNB4O00305 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.18■□□□□ 0.02
CACNB4O00305 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CACNB4O00305 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CACNB4O00305 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CACNB4O00305 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CACNB4O00305 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CACNB4O00305 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CACNB4O00305 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.18■□□□□ 0.02
CACNB4O00305 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CACNB4O00305 RNU1-114P-201ENST00000365297 166 ntBASIC15.18■□□□□ 0.02
CACNB4O00305 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CACNB4O00305 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CACNB4O00305 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.18■□□□□ 0.02
CACNB4O00305 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CACNB4O00305 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.18■□□□□ 0.02
CACNB4O00305 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CACNB4O00305 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CACNB4O00305 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.18■□□□□ 0.02
CACNB4O00305 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.18■□□□□ 0.02
CACNB4O00305 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CACNB4O00305 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.18■□□□□ 0.02
CACNB4O00305 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CACNB4O00305 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.18■□□□□ 0.02
CACNB4O00305 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CACNB4O00305 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.18■□□□□ 0.02
CACNB4O00305 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CACNB4O00305 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.18■□□□□ 0.02
CACNB4O00305 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.18■□□□□ 0.02
CACNB4O00305 SAMD11P1-201ENST00000571429 661 ntBASIC15.18■□□□□ 0.02
CACNB4O00305 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.18■□□□□ 0.02
CACNB4O00305 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.18■□□□□ 0.02
CACNB4O00305 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CACNB4O00305 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms