Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 TMEM198B-204ENST00000484016 896 ntBASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 AC015910.1-201ENST00000579400 975 ntBASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 MIR7706-201ENST00000613747 67 ntBASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 AC027612.1-201ENST00000445234 2395 ntBASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 PPT1-213ENST00000641319 2388 ntBASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 LILRP1-201ENST00000444199 1370 ntBASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TCRBV3S1A0A5B6 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 AC099521.3-201ENST00000624251 2938 ntBASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 AC022447.6-201ENST00000515522 438 ntBASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 AL049840.3-201ENST00000602669 611 ntBASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 AL121912.1-201ENST00000603683 238 ntBASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 AC130686.1-201ENST00000622936 2466 ntBASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TCRBV3S1A0A5B6 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms