Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 DKFZP434A062-201ENST00000573103 5021 ntBASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV1A0A0A0MS02 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 AC092053.3-201ENST00000641308 4975 ntBASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 AL512361.1-201ENST00000554200 418 ntBASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 AC015911.4-201ENST00000588022 1070 ntBASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 AC025048.3-201ENST00000590609 569 ntBASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 AC005702.4-201ENST00000618393 416 ntBASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 AL109936.8-201ENST00000641772 604 ntBASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 CELP-203ENST00000624767 2414 ntTSL 5 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV1A0A0A0MS02 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRGV1A0A0A0MS02 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms