Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 AC004945.1-201ENST00000416738 983 ntBASIC12.55□□□□□ -0.4
NKX6-2Q9C056 AC087499.1-201ENST00000418141 1075 ntBASIC12.55□□□□□ -0.4
NKX6-2Q9C056 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 AC023090.2-201ENST00000625182 2110 ntBASIC12.55□□□□□ -0.4
NKX6-2Q9C056 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX6-2Q9C056 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 ARMC10P1-201ENST00000313754 855 ntBASIC12.54□□□□□ -0.4
NKX6-2Q9C056 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 RCN1P2-201ENST00000398357 915 ntBASIC12.54□□□□□ -0.4
NKX6-2Q9C056 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 HAUS4P1-201ENST00000406739 1145 ntBASIC12.54□□□□□ -0.4
NKX6-2Q9C056 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX6-2Q9C056 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms