Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SMIM4Q8WVI0 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 AC140658.5-201ENST00000438532 169 ntBASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 SPTSSB-204ENST00000617024 1292 ntBASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM4Q8WVI0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SMIM4Q8WVI0 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SMIM4Q8WVI0 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SMIM4Q8WVI0 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
SMIM4Q8WVI0 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
SMIM4Q8WVI0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SMIM4Q8WVI0 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 AC007787.1-201ENST00000588095 1583 ntBASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 REXO1L4P-201ENST00000605109 1937 ntBASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 COL6A4P2-202ENST00000504443 2753 ntBASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 TMPOP1-202ENST00000424642 1267 ntBASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 MIR4751-201ENST00000578027 74 ntBASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM4Q8WVI0 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms