Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HPS6Q86YV9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.32■□□□□ 0.04
HPS6Q86YV9 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HPS6Q86YV9 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
HPS6Q86YV9 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HPS6Q86YV9 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
HPS6Q86YV9 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HPS6Q86YV9 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.31■□□□□ 0.04
HPS6Q86YV9 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HPS6Q86YV9 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 AC134407.2-201ENST00000625089 1978 ntBASIC15.31■□□□□ 0.04
HPS6Q86YV9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HPS6Q86YV9 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HPS6Q86YV9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.31■□□□□ 0.04
HPS6Q86YV9 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.31■□□□□ 0.04
HPS6Q86YV9 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 MIR661-201ENST00000384842 89 ntBASIC15.31■□□□□ 0.04
HPS6Q86YV9 AC092580.3-201ENST00000430932 139 ntBASIC15.31■□□□□ 0.04
HPS6Q86YV9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.31■□□□□ 0.04
HPS6Q86YV9 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.31■□□□□ 0.04
HPS6Q86YV9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.31■□□□□ 0.04
HPS6Q86YV9 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.31■□□□□ 0.04
HPS6Q86YV9 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.31■□□□□ 0.04
HPS6Q86YV9 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.31■□□□□ 0.04
HPS6Q86YV9 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.31■□□□□ 0.04
HPS6Q86YV9 AC073389.1-201ENST00000595595 795 ntBASIC15.31■□□□□ 0.04
HPS6Q86YV9 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HPS6Q86YV9 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
HPS6Q86YV9 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HPS6Q86YV9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS6Q86YV9 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.3■□□□□ 0.04
HPS6Q86YV9 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.3■□□□□ 0.04
HPS6Q86YV9 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HPS6Q86YV9 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HPS6Q86YV9 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.3■□□□□ 0.04
HPS6Q86YV9 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.3■□□□□ 0.04
HPS6Q86YV9 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.3■□□□□ 0.04
HPS6Q86YV9 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HPS6Q86YV9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 HLA-V-204ENST00000476601 1289 ntBASIC15.3■□□□□ 0.04
HPS6Q86YV9 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HPS6Q86YV9 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.3■□□□□ 0.04
HPS6Q86YV9 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.3■□□□□ 0.04
HPS6Q86YV9 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 AC027369.6-201ENST00000525520 931 ntBASIC15.3■□□□□ 0.04
HPS6Q86YV9 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.3■□□□□ 0.04
HPS6Q86YV9 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.3■□□□□ 0.04
HPS6Q86YV9 RARRES2P9-201ENST00000565168 469 ntBASIC15.3■□□□□ 0.04
HPS6Q86YV9 MIR4453-201ENST00000584019 89 ntBASIC15.3■□□□□ 0.04
HPS6Q86YV9 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.3■□□□□ 0.04
HPS6Q86YV9 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.3■□□□□ 0.04
HPS6Q86YV9 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.3■□□□□ 0.04
HPS6Q86YV9 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.3■□□□□ 0.04
HPS6Q86YV9 AC140479.7-201ENST00000636301 2332 ntBASIC15.3■□□□□ 0.04
HPS6Q86YV9 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.3■□□□□ 0.04
HPS6Q86YV9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.3■□□□□ 0.04
HPS6Q86YV9 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS6Q86YV9 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HPS6Q86YV9 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms