Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 AL139094.1-201ENST00000405549 1188 ntBASIC18.48■□□□□ 0.55
RFX7Q2KHR2 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 AC108725.1-201ENST00000495472 409 ntBASIC18.48■□□□□ 0.55
RFX7Q2KHR2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 ACE3P-201ENST00000423435 1973 ntBASIC18.48■□□□□ 0.55
RFX7Q2KHR2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RFX7Q2KHR2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 ACTBP8-201ENST00000403258 1108 ntBASIC18.47■□□□□ 0.55
RFX7Q2KHR2 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 AP005019.2-201ENST00000615104 511 ntBASIC18.47■□□□□ 0.55
RFX7Q2KHR2 AL603764.1-201ENST00000636452 321 ntBASIC18.47■□□□□ 0.55
RFX7Q2KHR2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX7Q2KHR2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 FAM197Y7-201ENST00000432892 766 ntBASIC18.46■□□□□ 0.55
RFX7Q2KHR2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 AC079316.1-201ENST00000548397 411 ntBASIC18.46■□□□□ 0.55
RFX7Q2KHR2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 LILRP1-201ENST00000444199 1370 ntBASIC18.46■□□□□ 0.55
RFX7Q2KHR2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RFX7Q2KHR2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RFX7Q2KHR2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RFX7Q2KHR2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms