Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
KCNQ4P56696 PAM16-211ENST00000575848 518 ntTSL 3 BASIC19.34■□□□□ 0.69
KCNQ4P56696 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
KCNQ4P56696 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC19.34■□□□□ 0.69
KCNQ4P56696 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC19.34■□□□□ 0.69
KCNQ4P56696 MEG3_2.1-201ENST00000611456 105 ntBASIC19.34■□□□□ 0.69
KCNQ4P56696 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC19.34■□□□□ 0.69
KCNQ4P56696 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.34■□□□□ 0.69
KCNQ4P56696 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
KCNQ4P56696 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNQ4P56696 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNQ4P56696 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.34■□□□□ 0.69
KCNQ4P56696 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNQ4P56696 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCNQ4P56696 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
KCNQ4P56696 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC19.33■□□□□ 0.69
KCNQ4P56696 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.33■□□□□ 0.69
KCNQ4P56696 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KCNQ4P56696 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.33■□□□□ 0.69
KCNQ4P56696 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KCNQ4P56696 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
KCNQ4P56696 TNRC18P3-201ENST00000441896 2691 ntBASIC19.33■□□□□ 0.69
KCNQ4P56696 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KCNQ4P56696 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
KCNQ4P56696 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
KCNQ4P56696 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
KCNQ4P56696 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KCNQ4P56696 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
KCNQ4P56696 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KCNQ4P56696 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KCNQ4P56696 PIN4P1-201ENST00000451079 396 ntBASIC19.33■□□□□ 0.68
KCNQ4P56696 RN7SL67P-201ENST00000492147 296 ntBASIC19.33■□□□□ 0.68
KCNQ4P56696 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC19.33■□□□□ 0.68
KCNQ4P56696 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC19.33■□□□□ 0.68
KCNQ4P56696 AC026803.1-201ENST00000569130 274 ntBASIC19.33■□□□□ 0.68
KCNQ4P56696 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC19.33■□□□□ 0.68
KCNQ4P56696 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KCNQ4P56696 AC007881.3-201ENST00000608897 607 ntBASIC19.33■□□□□ 0.68
KCNQ4P56696 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KCNQ4P56696 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.33■□□□□ 0.68
KCNQ4P56696 AC011840.2-201ENST00000563063 1520 ntBASIC19.33■□□□□ 0.68
KCNQ4P56696 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KCNQ4P56696 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
KCNQ4P56696 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
KCNQ4P56696 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
KCNQ4P56696 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.33■□□□□ 0.68
KCNQ4P56696 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.33■□□□□ 0.68
KCNQ4P56696 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KCNQ4P56696 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
KCNQ4P56696 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KCNQ4P56696 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
KCNQ4P56696 FAM90A7P-201ENST00000382628 1395 ntBASIC19.32■□□□□ 0.68
KCNQ4P56696 FAM90A23P-201ENST00000400136 1395 ntBASIC19.32■□□□□ 0.68
KCNQ4P56696 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ4P56696 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC19.32■□□□□ 0.68
KCNQ4P56696 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC19.32■□□□□ 0.68
KCNQ4P56696 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ4P56696 SLC9A7P1-202ENST00000556476 2239 ntBASIC19.32■□□□□ 0.68
KCNQ4P56696 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ4P56696 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ4P56696 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC19.32■□□□□ 0.68
KCNQ4P56696 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ4P56696 AP002803.1-201ENST00000528836 498 ntBASIC19.32■□□□□ 0.68
KCNQ4P56696 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC19.32■□□□□ 0.68
KCNQ4P56696 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ4P56696 OR6D1P-202ENST00000641007 5290 ntBASIC19.32■□□□□ 0.68
KCNQ4P56696 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ4P56696 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
KCNQ4P56696 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ4P56696 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC19.32■□□□□ 0.68
KCNQ4P56696 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ4P56696 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.32■□□□□ 0.68
KCNQ4P56696 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KCNQ4P56696 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
KCNQ4P56696 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.32■□□□□ 0.68
KCNQ4P56696 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.32■□□□□ 0.68
KCNQ4P56696 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC19.32■□□□□ 0.68
KCNQ4P56696 AC020916.1-201ENST00000587762 1774 ntBASIC19.32■□□□□ 0.68
KCNQ4P56696 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
KCNQ4P56696 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ4P56696 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
KCNQ4P56696 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ4P56696 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ4P56696 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ4P56696 AMT-239ENST00000636865 1914 ntTSL 5 BASIC19.31■□□□□ 0.68
KCNQ4P56696 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
KCNQ4P56696 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.31■□□□□ 0.68
KCNQ4P56696 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ4P56696 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
KCNQ4P56696 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
KCNQ4P56696 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.31■□□□□ 0.68
KCNQ4P56696 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
KCNQ4P56696 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ4P56696 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ4P56696 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.31■□□□□ 0.68
KCNQ4P56696 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ4P56696 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ4P56696 AL512430.1-201ENST00000392575 860 ntBASIC19.31■□□□□ 0.68
KCNQ4P56696 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KCNQ4P56696 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms