Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDKN2DP55273 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.23■□□□□ 0.03
CDKN2DP55273 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDKN2DP55273 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CDKN2DP55273 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDKN2DP55273 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.23■□□□□ 0.03
CDKN2DP55273 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDKN2DP55273 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDKN2DP55273 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CDKN2DP55273 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDKN2DP55273 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.23■□□□□ 0.03
CDKN2DP55273 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.23■□□□□ 0.03
CDKN2DP55273 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDKN2DP55273 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDKN2DP55273 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.23■□□□□ 0.03
CDKN2DP55273 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.22■□□□□ 0.03
CDKN2DP55273 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDKN2DP55273 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.22■□□□□ 0.03
CDKN2DP55273 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.22■□□□□ 0.03
CDKN2DP55273 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDKN2DP55273 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.22■□□□□ 0.03
CDKN2DP55273 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CDKN2DP55273 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.22■□□□□ 0.03
CDKN2DP55273 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.22■□□□□ 0.03
CDKN2DP55273 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.22■□□□□ 0.03
CDKN2DP55273 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.22■□□□□ 0.03
CDKN2DP55273 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.22■□□□□ 0.03
CDKN2DP55273 AC104794.3-201ENST00000566840 1248 ntBASIC15.22■□□□□ 0.03
CDKN2DP55273 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.22■□□□□ 0.03
CDKN2DP55273 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.22■□□□□ 0.03
CDKN2DP55273 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CDKN2DP55273 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.22■□□□□ 0.03
CDKN2DP55273 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.22■□□□□ 0.03
CDKN2DP55273 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.22■□□□□ 0.03
CDKN2DP55273 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDKN2DP55273 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDKN2DP55273 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CDKN2DP55273 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 AC007292.2-201ENST00000593524 1812 ntBASIC15.22■□□□□ 0.03
CDKN2DP55273 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.22■□□□□ 0.03
CDKN2DP55273 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.22■□□□□ 0.03
CDKN2DP55273 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
CDKN2DP55273 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDKN2DP55273 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDKN2DP55273 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2DP55273 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.21■□□□□ 0.03
CDKN2DP55273 AC232323.1-201ENST00000540724 2099 ntBASIC15.21■□□□□ 0.03
CDKN2DP55273 REXO1L5P-201ENST00000622260 2098 ntBASIC15.21■□□□□ 0.03
CDKN2DP55273 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDKN2DP55273 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2DP55273 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2DP55273 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CDKN2DP55273 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2DP55273 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2DP55273 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDKN2DP55273 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.21■□□□□ 0.03
CDKN2DP55273 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2DP55273 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2DP55273 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDKN2DP55273 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2DP55273 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2DP55273 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2DP55273 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.21■□□□□ 0.03
CDKN2DP55273 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2DP55273 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.21■□□□□ 0.03
CDKN2DP55273 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.21■□□□□ 0.03
CDKN2DP55273 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.21■□□□□ 0.03
CDKN2DP55273 GAPDHP40-201ENST00000505218 1006 ntBASIC15.21■□□□□ 0.03
CDKN2DP55273 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2DP55273 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.21■□□□□ 0.03
CDKN2DP55273 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2DP55273 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.21■□□□□ 0.03
CDKN2DP55273 SAMD11P1-201ENST00000571429 661 ntBASIC15.21■□□□□ 0.03
CDKN2DP55273 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.21■□□□□ 0.03
CDKN2DP55273 AC005498.2-205ENST00000593218 784 ntBASIC15.21■□□□□ 0.03
CDKN2DP55273 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.21■□□□□ 0.03
CDKN2DP55273 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms