Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.23■□□□□ 0.832e-13■■□□□ 14.3
U2AF2P26368 MPV17L-203ENST00000564148 529 ntTSL 420.02■□□□□ 0.82e-13■■□□□ 14.3
U2AF2P26368 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.26■□□□□ 0.672e-13■■□□□ 14.3
U2AF2P26368 AC140504.1-203ENST00000567442 476 ntTSL 218.33■□□□□ 0.522e-13■■□□□ 14.3
U2AF2P26368 FREM1-207ENST00000485068 699 ntTSL 39.65□□□□□ -0.866e-26■■□□□ 14.3
U2AF2P26368 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.57■□□□□ 0.882e-10■■□□□ 14.3
U2AF2P26368 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.562e-10■■□□□ 14.3
U2AF2P26368 ADSL-222ENST00000637669 1927 ntTSL 517.77■□□□□ 0.442e-10■■□□□ 14.3
U2AF2P26368 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC15.34■□□□□ 0.052e-10■■□□□ 14.3
U2AF2P26368 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.22e-10■■□□□ 14.3
U2AF2P26368 ADSL-219ENST00000636433 1444 ntTSL 512.95□□□□□ -0.342e-10■■□□□ 14.3
U2AF2P26368 ADSL-208ENST00000623063 4359 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.532e-10■■□□□ 14.3
U2AF2P26368 ADSL-210ENST00000623387 620 ntTSL 28.76□□□□□ -1.012e-10■■□□□ 14.3
U2AF2P26368 ADSL-216ENST00000625194 1079 ntTSL 57.5□□□□□ -1.212e-10■■□□□ 14.3
U2AF2P26368 ADSL-203ENST00000423176 728 ntTSL 56.09□□□□□ -1.432e-10■■□□□ 14.3
U2AF2P26368 ADSL-213ENST00000624027 732 ntTSL 33.69□□□□□ -1.822e-10■■□□□ 14.3
U2AF2P26368 ADSL-207ENST00000498234 323 ntTSL 23.41□□□□□ -1.862e-10■■□□□ 14.3
U2AF2P26368 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.092e-6■■□□□ 14.3
U2AF2P26368 SMAD4-215ENST00000592911 475 ntTSL 59.34□□□□□ -0.912e-6■■□□□ 14.3
U2AF2P26368 ATP11A-209ENST00000466946 431 ntTSL 58.56□□□□□ -1.042e-9■■□□□ 14.3
U2AF2P26368 L3MBTL1-205ENST00000422861 4322 ntAPPRIS ALT2 TSL 210.45□□□□□ -0.746e-7■■□□□ 14.3
U2AF2P26368 FARP1-237ENST00000601853 749 ntTSL 516.46■□□□□ 0.239e-8■■□□□ 14.3
U2AF2P26368 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.275e-8■■□□□ 14.3
U2AF2P26368 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.64■□□□□ 0.095e-8■■□□□ 14.3
U2AF2P26368 PPA1-201ENST00000373230 787 ntTSL 57.64□□□□□ -1.195e-8■■□□□ 14.3
U2AF2P26368 ZNF638-204ENST00000410075 3518 ntTSL 1 (best) BASIC12.96□□□□□ -0.335e-7■■□□□ 14.3
U2AF2P26368 ATP1A1-204ENST00000418797 654 ntTSL 321.91■■□□□ 1.12e-6■■□□□ 14.3
U2AF2P26368 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.012e-6■■□□□ 14.3
U2AF2P26368 ATP1A1-211ENST00000537345 3763 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.262e-6■■□□□ 14.3
U2AF2P26368 ATP1A1-202ENST00000369494 698 ntTSL 310.24□□□□□ -0.772e-6■■□□□ 14.3
U2AF2P26368 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC8.51□□□□□ -1.052e-6■■□□□ 14.3
U2AF2P26368 GTPBP2-207ENST00000459959 721 ntTSL 28.31□□□□□ -1.087e-7■■□□□ 14.3
U2AF2P26368 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.051e-6■■□□□ 14.3
U2AF2P26368 SLC23A2-204ENST00000468355 1934 ntTSL 1 (best)18.35■□□□□ 0.539e-7■■□□□ 14.3
U2AF2P26368 SLTM-220ENST00000559880 717 ntTSL 311.97□□□□□ -0.493e-11■■□□□ 14.3
U2AF2P26368 SLTM-215ENST00000558486 585 ntTSL 46.28□□□□□ -1.43e-11■■□□□ 14.3
U2AF2P26368 SLTM-224ENST00000560682 495 ntTSL 35.47□□□□□ -1.533e-11■■□□□ 14.3
U2AF2P26368 CNOT1-210ENST00000567133 553 ntTSL 512.23□□□□□ -0.452e-12■■□□□ 14.3
U2AF2P26368 RFWD2-209ENST00000491600 773 ntTSL 55.11□□□□□ -1.592e-6■■□□□ 14.3
U2AF2P26368 RFWD2-210ENST00000498306 617 ntTSL 53.6□□□□□ -1.832e-6■■□□□ 14.3
U2AF2P26368 PTAR1-201ENST00000340434 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.537e-7■■□□□ 14.3
U2AF2P26368 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.8□□□□□ -1.647e-7■■□□□ 14.3
U2AF2P26368 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC15.71■□□□□ 0.13e-6■■□□□ 14.3
U2AF2P26368 UBE2W-204ENST00000519255 575 ntTSL 49.94□□□□□ -0.823e-6■■□□□ 14.3
U2AF2P26368 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.543e-6■■□□□ 14.3
U2AF2P26368 UBE2W-205ENST00000519277 747 ntTSL 34.49□□□□□ -1.693e-6■■□□□ 14.3
U2AF2P26368 UBE2W-202ENST00000422906 3903 ntTSL 1 (best)1.92□□□□□ -2.13e-6■■□□□ 14.3
U2AF2P26368 FNDC3B-207ENST00000469491 2916 ntTSL 219.7■□□□□ 0.748e-8■■□□□ 14.2
U2AF2P26368 ATF2-210ENST00000417080 2113 ntTSL 1 (best)13.1□□□□□ -0.312e-7■■□□□ 14.2
U2AF2P26368 ATF2-219ENST00000456655 1861 ntTSL 1 (best)11.17□□□□□ -0.622e-7■■□□□ 14.2
U2AF2P26368 ATF2-206ENST00000409635 2109 ntTSL 5 BASIC10.36□□□□□ -0.752e-7■■□□□ 14.2
U2AF2P26368 ATF2-209ENST00000415955 1896 ntTSL 1 (best)10.15□□□□□ -0.782e-7■■□□□ 14.2
U2AF2P26368 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC9.14□□□□□ -0.952e-7■■□□□ 14.2
U2AF2P26368 ATF2-213ENST00000428760 1989 ntTSL 1 (best)8.68□□□□□ -1.022e-7■■□□□ 14.2
U2AF2P26368 ATF2-214ENST00000429579 2081 ntTSL 1 (best)8.56□□□□□ -1.042e-7■■□□□ 14.2
U2AF2P26368 ATF2-211ENST00000421438 1966 ntTSL 1 (best)8.06□□□□□ -1.122e-7■■□□□ 14.2
U2AF2P26368 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.11□□□□□ -1.272e-7■■□□□ 14.2
U2AF2P26368 ATF2-215ENST00000435004 1115 ntTSL 56.56□□□□□ -1.362e-7■■□□□ 14.2
U2AF2P26368 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.382e-7■■□□□ 14.2
U2AF2P26368 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.24□□□□□ -1.412e-7■■□□□ 14.2
U2AF2P26368 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.17□□□□□ -1.422e-7■■□□□ 14.2
U2AF2P26368 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.48□□□□□ -1.852e-7■■□□□ 14.2
U2AF2P26368 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.12□□□□□ -1.912e-7■■□□□ 14.2
U2AF2P26368 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.97■□□□□ 0.472e-7■■□□□ 14.2
U2AF2P26368 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.83■□□□□ 0.452e-7■■□□□ 14.2
U2AF2P26368 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.122e-7■■□□□ 14.2
U2AF2P26368 KYAT1-207ENST00000462722 2089 ntTSL 1 (best)14.85□□□□□ -0.032e-7■■□□□ 14.2
U2AF2P26368 KYAT1-210ENST00000483599 2490 ntTSL 212.32□□□□□ -0.442e-7■■□□□ 14.2
U2AF2P26368 ABCC3-204ENST00000503304 542 ntTSL 518.63■□□□□ 0.576e-6■■□□□ 14.2
U2AF2P26368 SESTD1-207ENST00000452991 460 ntTSL 310.2□□□□□ -0.788e-7■■□□□ 14.2
U2AF2P26368 FOXN3-210ENST00000555658 648 ntTSL 34.64□□□□□ -1.671e-6■■□□□ 14.2
U2AF2P26368 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.4■■□□□ 1.349e-8■■□□□ 14.2
U2AF2P26368 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.099e-8■■□□□ 14.2
U2AF2P26368 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.85■■□□□ 1.572e-9■■□□□ 14.2
U2AF2P26368 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.062e-9■■□□□ 14.2
U2AF2P26368 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.742e-9■■□□□ 14.2
U2AF2P26368 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.76■□□□□ 0.273e-7■■□□□ 14.2
U2AF2P26368 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.534e-7■■□□□ 14.2
U2AF2P26368 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.433e-9■■□□□ 14.2
U2AF2P26368 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.643e-9■■□□□ 14.2
U2AF2P26368 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.733e-9■■□□□ 14.2
U2AF2P26368 NEPRO-218ENST00000489848 1576 ntTSL 217.89■□□□□ 0.451e-7■■□□□ 14.2
U2AF2P26368 NEPRO-211ENST00000472637 2179 ntTSL 1 (best)16.7■□□□□ 0.261e-7■■□□□ 14.2
U2AF2P26368 NEPRO-214ENST00000473284 2056 ntTSL 216.17■□□□□ 0.181e-7■■□□□ 14.2
U2AF2P26368 NEPRO-205ENST00000462295 1382 ntTSL 214.85□□□□□ -0.031e-7■■□□□ 14.2
U2AF2P26368 NEPRO-207ENST00000469169 1817 ntTSL 214.35□□□□□ -0.111e-7■■□□□ 14.2
U2AF2P26368 NEPRO-208ENST00000469809 1512 ntTSL 314.05□□□□□ -0.161e-7■■□□□ 14.2
U2AF2P26368 NEPRO-217ENST00000486271 2842 ntTSL 213.77□□□□□ -0.211e-7■■□□□ 14.2
U2AF2P26368 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.291e-7■■□□□ 14.2
U2AF2P26368 NEPRO-204ENST00000461381 1048 ntTSL 212.22□□□□□ -0.451e-7■■□□□ 14.2
U2AF2P26368 NEPRO-202ENST00000383675 4672 ntTSL 1 (best) BASIC10.86□□□□□ -0.671e-7■■□□□ 14.2
U2AF2P26368 NEPRO-212ENST00000472705 1212 ntTSL 210.15□□□□□ -0.781e-7■■□□□ 14.2
U2AF2P26368 HMGCR-208ENST00000509431 421 ntTSL 214.89□□□□□ -0.032e-12■■□□□ 14.2
U2AF2P26368 UBXN7-205ENST00000429160 3158 ntTSL 212.38□□□□□ -0.431e-8■■□□□ 14.2
U2AF2P26368 RBM8A-208ENST00000634130 565 ntTSL 212.28□□□□□ -0.442e-12■■□□□ 14.2
U2AF2P26368 RBM8A-205ENST00000632040 495 ntTSL 211.49□□□□□ -0.572e-12■■□□□ 14.2
U2AF2P26368 RBM8A-207ENST00000633781 440 ntTSL 27.23□□□□□ -1.252e-12■■□□□ 14.2
U2AF2P26368 HMGCR-205ENST00000507942 527 ntTSL 46.39□□□□□ -1.392e-12■■□□□ 14.2
U2AF2P26368 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.451e-8■■□□□ 14.2
U2AF2P26368 UBXN7-203ENST00000413584 374 ntTSL 55.92□□□□□ -1.461e-8■■□□□ 14.2
Retrieved 100 of 36,523 protein–RNA pairs in 195.6 ms