RNA–Protein interactions for RNA: ENST00000507942.1

HMGCR-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 4

Gene HMGCR, Length 527 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-205ENST00000507942 AEBP2Q6ZN18 517 aaPredicted RBP19.92■□□□□ 0.78
HMGCR-205ENST00000507942 CHIC1Q5VXU3 224 aa18.4■□□□□ 0.54
HMGCR-205ENST00000507942 SENP3Q9H4L4 574 aaPredicted RBP16.89■□□□□ 0.29
HMGCR-205ENST00000507942 PHF23Q9BUL5 403 aaPredicted RBP16.67■□□□□ 0.26
HMGCR-205ENST00000507942 FOXD1Q16676 465 aa15.91■□□□□ 0.14
HMGCR-205ENST00000507942 POTEDQ86YR6 584 aa15.5■□□□□ 0.07
HMGCR-205ENST00000507942 MSH5O43196 834 aa14.94□□□□□ -0.02
HMGCR-205ENST00000507942 PIAS4Q8N2W9 510 aaPredicted RBP14.67□□□□□ -0.06
HMGCR-205ENST00000507942 PPP6R1Q9UPN7 881 aa14.58□□□□□ -0.08
HMGCR-205ENST00000507942 NISCHQ9Y2I1 1504 aa14.48□□□□□ -0.09
HMGCR-205ENST00000507942 ADRA2BP18089 450 aa14.45□□□□□ -0.1
HMGCR-205ENST00000507942 PLPPR3Q6T4P5 718 aa14.37□□□□□ -0.11
HMGCR-205ENST00000507942 MAPK8IP2Q13387 824 aaPredicted RBP13.45□□□□□ -0.26
HMGCR-205ENST00000507942 DMRT2Q9Y5R5 561 aa13.37□□□□□ -0.27
HMGCR-205ENST00000507942 CACNB1Q02641 598 aaPredicted RBP13.12□□□□□ -0.31
HMGCR-205ENST00000507942 SCAF1Q9H7N4 1312 aaKnown RBP13.03□□□□□ -0.32
HMGCR-205ENST00000507942 CCDC180Q9P1Z9 1646 aa12.95□□□□□ -0.34
HMGCR-205ENST00000507942 ABCC9O60706 1549 aa12.85□□□□□ -0.35
HMGCR-205ENST00000507942 RNF39Q9H2S5 420 aa12.79□□□□□ -0.36
HMGCR-205ENST00000507942 DCAF8L1A6NGE4 600 aa12.76□□□□□ -0.37
HMGCR-205ENST00000507942 HOXD11P31277 338 aaPredicted RBP12.71□□□□□ -0.37
HMGCR-205ENST00000507942 PPP4R3CPQ6ZMV5 832 aa12.59□□□□□ -0.39
HMGCR-205ENST00000507942 C1QBPQ07021 282 aaKnown RBP12.51□□□□□ -0.41
HMGCR-205ENST00000507942 RNF216Q9NWF9 866 aaPredicted RBP12.44□□□□□ -0.42
HMGCR-205ENST00000507942 CNKSR2Q8WXI2 1034 aa12.42□□□□□ -0.42
HMGCR-205ENST00000507942 DNAJC5BQ9UF47 199 aa12.3□□□□□ -0.44
HMGCR-205ENST00000507942 RB1CC1Q8TDY2 1594 aa12.28□□□□□ -0.44
HMGCR-205ENST00000507942 NACADO15069 1562 aa12.24□□□□□ -0.45
HMGCR-205ENST00000507942 MYO15BQ96JP2 1530 aa12.15□□□□□ -0.46
HMGCR-205ENST00000507942 NCBP3Q53F19 620 aaKnown RBP12.08□□□□□ -0.48
HMGCR-205ENST00000507942 DCAF8L2P0C7V8 631 aa12.07□□□□□ -0.48
HMGCR-205ENST00000507942 ZCCHC6Q5VYS8 1495 aaKnown RBP12.03□□□□□ -0.48
HMGCR-205ENST00000507942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.02□□□□□ -0.49
HMGCR-205ENST00000507942 POTEHQ6S545 545 aa12.01□□□□□ -0.49
HMGCR-205ENST00000507942 DCAF1Q9Y4B6 1507 aa12.01□□□□□ -0.49
HMGCR-205ENST00000507942 UNC13AQ9UPW8 1703 aa11.97□□□□□ -0.49
HMGCR-205ENST00000507942 PABPN1Q86U42 306 aaKnown RBP eCLIP11.97□□□□□ -0.49
HMGCR-205ENST00000507942 BICRAQ9NZM4 1560 aa11.96□□□□□ -0.5
HMGCR-205ENST00000507942 SHROOM4Q9ULL8 1493 aa11.84□□□□□ -0.51
HMGCR-205ENST00000507942 NPM3O75607 178 aaKnown RBP11.82□□□□□ -0.52
HMGCR-205ENST00000507942 DSG3P32926 999 aa11.82□□□□□ -0.52
HMGCR-205ENST00000507942 U3KPZ7 1027 aaPredicted RBP11.82□□□□□ -0.52
HMGCR-205ENST00000507942 SPINK5Q9NQ38 1064 aaPredicted RBP11.81□□□□□ -0.52
HMGCR-205ENST00000507942 SCRIBQ14160 1630 aa11.78□□□□□ -0.52
HMGCR-205ENST00000507942 KCNA4P22459 653 aa11.71□□□□□ -0.53
HMGCR-205ENST00000507942 CAPN15O75808 1086 aa11.7□□□□□ -0.54
HMGCR-205ENST00000507942 EIF4G1Q04637 1599 aaKnown RBP11.63□□□□□ -0.55
HMGCR-205ENST00000507942 CC2D2AQ9P2K1 1620 aa11.62□□□□□ -0.55
HMGCR-205ENST00000507942 CECR2Q9BXF3 1484 aa11.59□□□□□ -0.55
HMGCR-205ENST00000507942 SLC4A2P04920 1241 aa11.47□□□□□ -0.57
HMGCR-205ENST00000507942 ABCB7O75027 752 aa11.45□□□□□ -0.58
HMGCR-205ENST00000507942 TRHP20396 242 aaPredicted RBP11.41□□□□□ -0.58
HMGCR-205ENST00000507942 ZNF219Q9P2Y4 722 aaPredicted RBP11.32□□□□□ -0.6
HMGCR-205ENST00000507942 NCAPD3P42695 1498 aa11.32□□□□□ -0.6
HMGCR-205ENST00000507942 ATAD2BQ9ULI0 1458 aa11.28□□□□□ -0.6
HMGCR-205ENST00000507942 SMARCA4P51532 1647 aa11.27□□□□□ -0.61
HMGCR-205ENST00000507942 SMARCA2P51531 1590 aa11.24□□□□□ -0.61
HMGCR-205ENST00000507942 HMGXB3Q12766 1538 aa11.24□□□□□ -0.61
HMGCR-205ENST00000507942 BAZ1AQ9NRL2 1556 aaPredicted RBP11.22□□□□□ -0.61
HMGCR-205ENST00000507942 APLP2Q06481 763 aa11.21□□□□□ -0.61
HMGCR-205ENST00000507942 PEG3Q9GZU2 1588 aa11.2□□□□□ -0.62
HMGCR-205ENST00000507942 CHRDL2Q6WN34 429 aa11.19□□□□□ -0.62
HMGCR-205ENST00000507942 SLC4A1APQ9BWU0 796 aaKnown RBP11.17□□□□□ -0.62
HMGCR-205ENST00000507942 RBM42Q9BTD8 480 aaKnown RBP11.16□□□□□ -0.62
HMGCR-205ENST00000507942 BAZ1BQ9UIG0 1483 aaKnown RBP11.15□□□□□ -0.62
HMGCR-205ENST00000507942 MROH2BQ7Z745 1585 aa11.15□□□□□ -0.62
HMGCR-205ENST00000507942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.13□□□□□ -0.63
HMGCR-205ENST00000507942 HNRNPUL2Q1KMD3 747 aaKnown RBP11.13□□□□□ -0.63
HMGCR-205ENST00000507942 SAMD1Q6SPF0 538 aaPredicted RBP11.1□□□□□ -0.63
HMGCR-205ENST00000507942 CUX2O14529 1486 aa11.09□□□□□ -0.63
HMGCR-205ENST00000507942 ERCC6Q03468 1493 aa11.08□□□□□ -0.64
HMGCR-205ENST00000507942 NESP48681 1621 aa11.08□□□□□ -0.64
HMGCR-205ENST00000507942 SP7Q8TDD2 431 aaPredicted RBP11.03□□□□□ -0.64
HMGCR-205ENST00000507942 POLA2Q14181 598 aa11.02□□□□□ -0.65
HMGCR-205ENST00000507942 LAMC3Q9Y6N6 1575 aa11.02□□□□□ -0.65
HMGCR-205ENST00000507942 DNAJC5Q9H3Z4 198 aa10.99□□□□□ -0.65
HMGCR-205ENST00000507942 MYCNP04198 464 aaPredicted RBP10.98□□□□□ -0.65
HMGCR-205ENST00000507942 WIZO95785 1651 aa10.98□□□□□ -0.65
HMGCR-205ENST00000507942 THOC2Q8NI27 1593 aaKnown RBP10.97□□□□□ -0.65
HMGCR-205ENST00000507942 RSF1Q96T23 1441 aaPredicted RBP10.96□□□□□ -0.65
HMGCR-205ENST00000507942 CADPSQ9ULU8 1353 aa10.96□□□□□ -0.65
HMGCR-205ENST00000507942 FOXD4L1Q9NU39 408 aa10.96□□□□□ -0.65
HMGCR-205ENST00000507942 PDS5BQ9NTI5 1447 aa10.95□□□□□ -0.66
HMGCR-205ENST00000507942 KIF21AQ7Z4S6 1674 aa10.91□□□□□ -0.66
HMGCR-205ENST00000507942 TOP2AP11388 1531 aaKnown RBP10.89□□□□□ -0.67
HMGCR-205ENST00000507942 CFTRP13569 1480 aa10.87□□□□□ -0.67
HMGCR-205ENST00000507942 MRC2Q9UBG0 1479 aa10.87□□□□□ -0.67
HMGCR-205ENST00000507942 PIP4P2Q8N4L2 257 aa10.86□□□□□ -0.67
HMGCR-205ENST00000507942 AKT1S1Q96B36 256 aa10.86□□□□□ -0.67
HMGCR-205ENST00000507942 WDR62O43379 1518 aa10.84□□□□□ -0.67
HMGCR-205ENST00000507942 FANCD2Q9BXW9 1451 aa10.82□□□□□ -0.68
HMGCR-205ENST00000507942 CEP164Q9UPV0 1460 aa10.82□□□□□ -0.68
HMGCR-205ENST00000507942 REM2Q8IYK8 340 aaPredicted RBP10.81□□□□□ -0.68
HMGCR-205ENST00000507942 ATF5Q9Y2D1 282 aaPredicted RBP10.8□□□□□ -0.68
HMGCR-205ENST00000507942 CCDC88BA6NC98 1476 aa10.75□□□□□ -0.69
HMGCR-205ENST00000507942 URB2Q14146 1524 aaKnown RBP10.74□□□□□ -0.69
HMGCR-205ENST00000507942 HAX1O00165 279 aa10.72□□□□□ -0.69
HMGCR-205ENST00000507942 PITPNM1O00562 1244 aa10.72□□□□□ -0.69
HMGCR-205ENST00000507942 ZBTB22O15209 634 aa10.72□□□□□ -0.69
HMGCR-205ENST00000507942 FXR2P51116 673 aaKnown RBP eCLIP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms