RNA–Protein interactions for RNA: ENST00000498306.5

RFWD2-210, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 5

Gene RFWD2, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-210ENST00000498306 AEBP2Q6ZN18 517 aaPredicted RBP20.36■□□□□ 0.85
RFWD2-210ENST00000498306 CHIC1Q5VXU3 224 aa19.8■□□□□ 0.76
RFWD2-210ENST00000498306 SENP3Q9H4L4 574 aaPredicted RBP17.39■□□□□ 0.37
RFWD2-210ENST00000498306 PHF23Q9BUL5 403 aaPredicted RBP17.34■□□□□ 0.37
RFWD2-210ENST00000498306 FOXD1Q16676 465 aa16.1■□□□□ 0.17
RFWD2-210ENST00000498306 PLPPR3Q6T4P5 718 aa16.04■□□□□ 0.16
RFWD2-210ENST00000498306 PPP6R1Q9UPN7 881 aa15.33■□□□□ 0.04
RFWD2-210ENST00000498306 ADRA2BP18089 450 aa15.31■□□□□ 0.04
RFWD2-210ENST00000498306 PIAS4Q8N2W9 510 aaPredicted RBP15.16■□□□□ 0.02
RFWD2-210ENST00000498306 MSH5O43196 834 aa14.98□□□□□ -0.01
RFWD2-210ENST00000498306 SCAF1Q9H7N4 1312 aaKnown RBP14.13□□□□□ -0.15
RFWD2-210ENST00000498306 PPP4R3CPQ6ZMV5 832 aa14.07□□□□□ -0.16
RFWD2-210ENST00000498306 MAPK8IP2Q13387 824 aaPredicted RBP13.92□□□□□ -0.18
RFWD2-210ENST00000498306 POTEDQ86YR6 584 aa13.84□□□□□ -0.19
RFWD2-210ENST00000498306 DMRT2Q9Y5R5 561 aa13.84□□□□□ -0.19
RFWD2-210ENST00000498306 CNKSR2Q8WXI2 1034 aa13.75□□□□□ -0.21
RFWD2-210ENST00000498306 NCBP3Q53F19 620 aaKnown RBP13.72□□□□□ -0.21
RFWD2-210ENST00000498306 KCNA4P22459 653 aa13.54□□□□□ -0.24
RFWD2-210ENST00000498306 RNF216Q9NWF9 866 aaPredicted RBP13.53□□□□□ -0.24
RFWD2-210ENST00000498306 HOXD11P31277 338 aaPredicted RBP13.51□□□□□ -0.25
RFWD2-210ENST00000498306 NPM3O75607 178 aaKnown RBP13.45□□□□□ -0.26
RFWD2-210ENST00000498306 DCAF8L1A6NGE4 600 aa13.2□□□□□ -0.3
RFWD2-210ENST00000498306 DNAJC5BQ9UF47 199 aa13.19□□□□□ -0.3
RFWD2-210ENST00000498306 SLC4A1APQ9BWU0 796 aaKnown RBP12.9□□□□□ -0.34
RFWD2-210ENST00000498306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.84□□□□□ -0.353e-6■□□□□ 8.5
RFWD2-210ENST00000498306 RNF39Q9H2S5 420 aa12.78□□□□□ -0.36
RFWD2-210ENST00000498306 SLC4A2P04920 1241 aa12.73□□□□□ -0.37
RFWD2-210ENST00000498306 C1QBPQ07021 282 aaKnown RBP12.66□□□□□ -0.38
RFWD2-210ENST00000498306 U3KPZ7 1027 aaPredicted RBP12.61□□□□□ -0.39
RFWD2-210ENST00000498306 FOXD4L1Q9NU39 408 aa12.57□□□□□ -0.4
RFWD2-210ENST00000498306 CACNB1Q02641 598 aaPredicted RBP12.55□□□□□ -0.4
RFWD2-210ENST00000498306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.49□□□□□ -0.41
RFWD2-210ENST00000498306 HNRNPUL2Q1KMD3 747 aaKnown RBP12.49□□□□□ -0.41
RFWD2-210ENST00000498306 MYCNP04198 464 aaPredicted RBP12.48□□□□□ -0.41
RFWD2-210ENST00000498306 ZBTB22O15209 634 aa12.44□□□□□ -0.42
RFWD2-210ENST00000498306 APLP2Q06481 763 aa12.42□□□□□ -0.42
RFWD2-210ENST00000498306 SAMD1Q6SPF0 538 aaPredicted RBP12.41□□□□□ -0.42
RFWD2-210ENST00000498306 EHMT2Q96KQ7 1210 aa12.31□□□□□ -0.44
RFWD2-210ENST00000498306 CSRNP3Q8WYN3 585 aa12.27□□□□□ -0.45
RFWD2-210ENST00000498306 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.45
RFWD2-210ENST00000498306 CAPN15O75808 1086 aa12.26□□□□□ -0.45
RFWD2-210ENST00000498306 ZNF219Q9P2Y4 722 aaPredicted RBP12.22□□□□□ -0.45
RFWD2-210ENST00000498306 ATXN8OSP0DMR3 200 aa12.18□□□□□ -0.46
RFWD2-210ENST00000498306 TRHP20396 242 aaPredicted RBP12.15□□□□□ -0.46
RFWD2-210ENST00000498306 DSG3P32926 999 aa12.1□□□□□ -0.47
RFWD2-210ENST00000498306 ATF5Q9Y2D1 282 aaPredicted RBP12.07□□□□□ -0.48
RFWD2-210ENST00000498306 ABCB7O75027 752 aa11.98□□□□□ -0.49
RFWD2-210ENST00000498306 POLA2Q14181 598 aa11.93□□□□□ -0.5
RFWD2-210ENST00000498306 ZBTB12Q9Y330 459 aaPredicted RBP11.81□□□□□ -0.52
RFWD2-210ENST00000498306 FBLN2P98095 1184 aa11.67□□□□□ -0.54
RFWD2-210ENST00000498306 RBM42Q9BTD8 480 aaKnown RBP11.6□□□□□ -0.55
RFWD2-210ENST00000498306 MKRN4PQ13434 485 aaPredicted RBP11.56□□□□□ -0.56
RFWD2-210ENST00000498306 OSCARQ8IYS5 282 aa11.53□□□□□ -0.56
RFWD2-210ENST00000498306 SPDYE2BA6NHP3 402 aa11.45□□□□□ -0.58
RFWD2-210ENST00000498306 SPDYE6P0CI01 402 aa11.45□□□□□ -0.58
RFWD2-210ENST00000498306 SPDYE2Q495Y8 402 aa11.45□□□□□ -0.58
RFWD2-210ENST00000498306 AKT1S1Q96B36 256 aa11.4□□□□□ -0.58
RFWD2-210ENST00000498306 ZNF692Q9BU19 519 aaPredicted RBP11.35□□□□□ -0.59
RFWD2-210ENST00000498306 SSUH2Q9Y2M2 353 aa11.33□□□□□ -0.6
RFWD2-210ENST00000498306 SPDYE4A6NLX3 237 aa11.26□□□□□ -0.61
RFWD2-210ENST00000498306 REM2Q8IYK8 340 aaPredicted RBP11.25□□□□□ -0.61
RFWD2-210ENST00000498306 PABPN1Q86U42 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
RFWD2-210ENST00000498306 SPDYE1Q8NFV5 336 aaPredicted RBP11.15□□□□□ -0.62
RFWD2-210ENST00000498306 PITPNM1O00562 1244 aa11.12□□□□□ -0.63
RFWD2-210ENST00000498306 CHRDL2Q6WN34 429 aa11.12□□□□□ -0.63
RFWD2-210ENST00000498306 FKBP8Q14318 412 aa11.11□□□□□ -0.63
RFWD2-210ENST00000498306 PROM2Q8N271 834 aa11.08□□□□□ -0.64
RFWD2-210ENST00000498306 CLEC11AQ9Y240 323 aa11.05□□□□□ -0.64
RFWD2-210ENST00000498306 STAG3Q9UJ98 1225 aa11.04□□□□□ -0.64
RFWD2-210ENST00000498306 PRR29P0C7W0 189 aa10.96□□□□□ -0.65
RFWD2-210ENST00000498306 FXR2P51116 673 aaKnown RBP eCLIP10.96□□□□□ -0.65
RFWD2-210ENST00000498306 POTEHQ6S545 545 aa10.94□□□□□ -0.66
RFWD2-210ENST00000498306 PIP4P2Q8N4L2 257 aa10.93□□□□□ -0.66
RFWD2-210ENST00000498306 PRKAR2AP13861 404 aaKnown RBP10.84□□□□□ -0.67
RFWD2-210ENST00000498306 FBXO3Q9UK99 471 aa10.83□□□□□ -0.68
RFWD2-210ENST00000498306 CHADLQ6NUI6 762 aa10.76□□□□□ -0.69
RFWD2-210ENST00000498306 CREBZFQ9NS37 354 aa10.76□□□□□ -0.69
RFWD2-210ENST00000498306 PLEKHG5O94827 1062 aa10.72□□□□□ -0.69
RFWD2-210ENST00000498306 FARP1Q9Y4F1 1045 aaPredicted RBP10.7□□□□□ -0.7
RFWD2-210ENST00000498306 MIER1Q8N108 512 aa10.69□□□□□ -0.7
RFWD2-210ENST00000498306 PLCD3Q8N3E9 789 aa10.67□□□□□ -0.7
RFWD2-210ENST00000498306 NPM1P06748 294 aaKnown RBP eCLIP10.64□□□□□ -0.71
RFWD2-210ENST00000498306 VASPP50552 380 aaPredicted RBP10.64□□□□□ -0.71
RFWD2-210ENST00000498306 MNX1P50219 401 aaPredicted RBP10.63□□□□□ -0.71
RFWD2-210ENST00000498306 ZBTB47Q9UFB7 747 aaPredicted RBP10.63□□□□□ -0.71
RFWD2-210ENST00000498306 HAX1O00165 279 aa10.62□□□□□ -0.71
RFWD2-210ENST00000498306 C19orf67A6NJJ6 358 aa10.59□□□□□ -0.71
RFWD2-210ENST00000498306 CD44P16070 742 aaKnown RBP10.53□□□□□ -0.72
RFWD2-210ENST00000498306 PAK3O75914 559 aaPredicted RBP10.5□□□□□ -0.73
RFWD2-210ENST00000498306 KLHL34Q8N239 644 aa10.48□□□□□ -0.73
RFWD2-210ENST00000498306 EVX2Q03828 476 aa10.47□□□□□ -0.73
RFWD2-210ENST00000498306 SP7Q8TDD2 431 aaPredicted RBP10.47□□□□□ -0.73
RFWD2-210ENST00000498306 IFNLR1Q8IU57 520 aaPredicted RBP10.46□□□□□ -0.73
RFWD2-210ENST00000498306 ZRANB1Q9UGI0 708 aa10.44□□□□□ -0.74
RFWD2-210ENST00000498306 NUBP1P53384 320 aa10.43□□□□□ -0.74
RFWD2-210ENST00000498306 CLCN6P51797 869 aa10.41□□□□□ -0.74
RFWD2-210ENST00000498306 RASEFQ8IZ41 740 aa10.41□□□□□ -0.74
RFWD2-210ENST00000498306 ZNF579Q8NAF0 562 aaKnown RBP10.41□□□□□ -0.74
RFWD2-210ENST00000498306 SPOCK2Q92563 424 aa10.39□□□□□ -0.75
RFWD2-210ENST00000498306 FAM212AQ96EL1 285 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms