Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 BANF1P1-201ENST00000553684 263 ntBASIC13.6□□□□□ -0.23
UBCP0CG48 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.6□□□□□ -0.23
UBCP0CG48 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.6□□□□□ -0.23
UBCP0CG48 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.6□□□□□ -0.23
UBCP0CG48 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.6□□□□□ -0.23
UBCP0CG48 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.6□□□□□ -0.23
UBCP0CG48 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
UBCP0CG48 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.6□□□□□ -0.23
UBCP0CG48 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 AC005252.3-201ENST00000623855 2258 ntBASIC13.6□□□□□ -0.23
UBCP0CG48 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
UBCP0CG48 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
UBCP0CG48 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
UBCP0CG48 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
UBCP0CG48 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
UBCP0CG48 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.59□□□□□ -0.23
UBCP0CG48 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.59□□□□□ -0.23
UBCP0CG48 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 HIST3H2BA-201ENST00000436555 524 ntBASIC13.59□□□□□ -0.23
UBCP0CG48 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.59□□□□□ -0.23
UBCP0CG48 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.59□□□□□ -0.23
UBCP0CG48 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.59□□□□□ -0.23
UBCP0CG48 ALG1L5P-201ENST00000482043 771 ntBASIC13.59□□□□□ -0.23
UBCP0CG48 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
UBCP0CG48 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.59□□□□□ -0.23
UBCP0CG48 PGAM5P1-201ENST00000518923 814 ntBASIC13.59□□□□□ -0.23
UBCP0CG48 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.59□□□□□ -0.23
UBCP0CG48 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
UBCP0CG48 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.59□□□□□ -0.23
UBCP0CG48 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
UBCP0CG48 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.59□□□□□ -0.23
UBCP0CG48 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.59□□□□□ -0.23
UBCP0CG48 AC007967.4-201ENST00000614700 386 ntBASIC13.59□□□□□ -0.23
UBCP0CG48 AC105339.1-204ENST00000636249 355 ntBASIC13.59□□□□□ -0.23
UBCP0CG48 AC005840.4-201ENST00000541242 2494 ntBASIC13.59□□□□□ -0.23
UBCP0CG48 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.59□□□□□ -0.23
UBCP0CG48 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.59□□□□□ -0.23
UBCP0CG48 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
UBCP0CG48 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBCP0CG48 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.59□□□□□ -0.23
UBCP0CG48 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
UBCP0CG48 KRT8P12-202ENST00000472924 1397 ntBASIC13.58□□□□□ -0.23
UBCP0CG48 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.58□□□□□ -0.23
UBCP0CG48 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
UBCP0CG48 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
UBCP0CG48 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
UBCP0CG48 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
UBCP0CG48 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
UBCP0CG48 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
UBCP0CG48 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
UBCP0CG48 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
UBCP0CG48 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.58□□□□□ -0.24
UBCP0CG48 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.58□□□□□ -0.24
UBCP0CG48 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.58□□□□□ -0.24
UBCP0CG48 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.58□□□□□ -0.24
UBCP0CG48 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBCP0CG48 CICP11-201ENST00000434745 2827 ntBASIC13.58□□□□□ -0.24
UBCP0CG48 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms