Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.56■□□□□ 0.08
RETP07949 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RETP07949 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RETP07949 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RETP07949 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RETP07949 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RETP07949 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RETP07949 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RETP07949 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RETP07949 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RETP07949 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.56■□□□□ 0.08
RETP07949 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RETP07949 MAGEA5-201ENST00000446757 942 ntBASIC15.56■□□□□ 0.08
RETP07949 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.56■□□□□ 0.08
RETP07949 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.56■□□□□ 0.08
RETP07949 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.56■□□□□ 0.08
RETP07949 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.56■□□□□ 0.08
RETP07949 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.56■□□□□ 0.08
RETP07949 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RETP07949 NDUFV2P1-201ENST00000596415 907 ntBASIC15.56■□□□□ 0.08
RETP07949 AC093813.1-201ENST00000605066 256 ntBASIC15.56■□□□□ 0.08
RETP07949 AC132938.4-201ENST00000623835 848 ntBASIC15.56■□□□□ 0.08
RETP07949 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.56■□□□□ 0.08
RETP07949 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RETP07949 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.56■□□□□ 0.08
RETP07949 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RETP07949 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RETP07949 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RETP07949 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RETP07949 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.56■□□□□ 0.08
RETP07949 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RETP07949 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RETP07949 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RETP07949 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.55■□□□□ 0.08
RETP07949 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.55■□□□□ 0.08
RETP07949 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
RETP07949 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.55■□□□□ 0.08
RETP07949 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
RETP07949 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.55■□□□□ 0.08
RETP07949 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RETP07949 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.55■□□□□ 0.08
RETP07949 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.55■□□□□ 0.08
RETP07949 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.55■□□□□ 0.08
RETP07949 CHMP4BP1-201ENST00000556017 588 ntBASIC15.55■□□□□ 0.08
RETP07949 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.55■□□□□ 0.08
RETP07949 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.55■□□□□ 0.08
RETP07949 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.55■□□□□ 0.08
RETP07949 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.55■□□□□ 0.08
RETP07949 MIR7845-201ENST00000618396 99 ntBASIC15.55■□□□□ 0.08
RETP07949 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
RETP07949 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RETP07949 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RETP07949 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.55■□□□□ 0.08
RETP07949 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.55■□□□□ 0.08
RETP07949 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.55■□□□□ 0.08
RETP07949 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
RETP07949 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RETP07949 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.55■□□□□ 0.08
RETP07949 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RETP07949 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RETP07949 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RETP07949 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
RETP07949 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RETP07949 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RETP07949 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RETP07949 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RETP07949 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RETP07949 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.54■□□□□ 0.08
RETP07949 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.54■□□□□ 0.08
RETP07949 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RETP07949 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.54■□□□□ 0.08
RETP07949 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
RETP07949 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.54■□□□□ 0.08
RETP07949 KRT18P64-201ENST00000434946 1219 ntBASIC15.54■□□□□ 0.08
RETP07949 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RETP07949 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RETP07949 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms