Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPM3P06753 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM3P06753 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM3P06753 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
TPM3P06753 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC17.37■□□□□ 0.37
TPM3P06753 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TPM3P06753 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.37■□□□□ 0.37
TPM3P06753 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM3P06753 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC17.37■□□□□ 0.37
TPM3P06753 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.37■□□□□ 0.37
TPM3P06753 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.37■□□□□ 0.37
TPM3P06753 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPM3P06753 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
TPM3P06753 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TPM3P06753 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPM3P06753 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC17.37■□□□□ 0.37
TPM3P06753 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM3P06753 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TPM3P06753 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM3P06753 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM3P06753 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.37■□□□□ 0.37
TPM3P06753 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM3P06753 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM3P06753 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM3P06753 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPM3P06753 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TPM3P06753 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM3P06753 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPM3P06753 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TPM3P06753 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
TPM3P06753 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM3P06753 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM3P06753 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TPM3P06753 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC17.36■□□□□ 0.37
TPM3P06753 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC17.36■□□□□ 0.37
TPM3P06753 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC17.36■□□□□ 0.37
TPM3P06753 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
TPM3P06753 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.36■□□□□ 0.37
TPM3P06753 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TPM3P06753 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.36■□□□□ 0.37
TPM3P06753 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
TPM3P06753 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPM3P06753 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TPM3P06753 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.36■□□□□ 0.37
TPM3P06753 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.36■□□□□ 0.37
TPM3P06753 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.36■□□□□ 0.37
TPM3P06753 RNA5SP410-201ENST00000516285 106 ntBASIC17.36■□□□□ 0.37
TPM3P06753 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.36■□□□□ 0.37
TPM3P06753 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.36■□□□□ 0.37
TPM3P06753 AC116407.3-201ENST00000623905 1129 ntBASIC17.36■□□□□ 0.37
TPM3P06753 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TPM3P06753 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.36■□□□□ 0.37
TPM3P06753 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM3P06753 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM3P06753 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.36■□□□□ 0.37
TPM3P06753 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM3P06753 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM3P06753 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM3P06753 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.36■□□□□ 0.37
TPM3P06753 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPM3P06753 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TPM3P06753 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM3P06753 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TPM3P06753 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM3P06753 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM3P06753 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM3P06753 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM3P06753 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.35■□□□□ 0.37
TPM3P06753 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.35■□□□□ 0.37
TPM3P06753 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM3P06753 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.35■□□□□ 0.37
TPM3P06753 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.35■□□□□ 0.37
TPM3P06753 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM3P06753 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TPM3P06753 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM3P06753 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.35■□□□□ 0.37
TPM3P06753 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.35■□□□□ 0.37
TPM3P06753 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM3P06753 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.35■□□□□ 0.37
TPM3P06753 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.35■□□□□ 0.37
TPM3P06753 AL139010.1-201ENST00000454878 894 ntBASIC17.35■□□□□ 0.37
TPM3P06753 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.35■□□□□ 0.37
TPM3P06753 AC112191.1-201ENST00000523689 701 ntBASIC17.35■□□□□ 0.37
TPM3P06753 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.35■□□□□ 0.37
TPM3P06753 KRT19P2-202ENST00000557173 1012 ntBASIC17.35■□□□□ 0.37
TPM3P06753 RARRES2P8-201ENST00000566335 367 ntBASIC17.35■□□□□ 0.37
TPM3P06753 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM3P06753 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TPM3P06753 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.35■□□□□ 0.37
TPM3P06753 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TPM3P06753 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.35■□□□□ 0.37
TPM3P06753 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.35■□□□□ 0.37
TPM3P06753 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.35■□□□□ 0.37
TPM3P06753 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM3P06753 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM3P06753 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.35■□□□□ 0.37
TPM3P06753 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TPM3P06753 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TPM3P06753 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TPM3P06753 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms