Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBC1P01850 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBC1P01850 AC010319.3-201ENST00000597028 470 ntBASIC15.43■□□□□ 0.06
TRBC1P01850 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRBC1P01850 BX539320.1-201ENST00000623759 877 ntBASIC15.43■□□□□ 0.06
TRBC1P01850 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBC1P01850 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBC1P01850 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBC1P01850 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBC1P01850 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBC1P01850 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBC1P01850 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBC1P01850 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBC1P01850 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBC1P01850 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBC1P01850 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBC1P01850 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBC1P01850 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBC1P01850 LINC00554-201ENST00000564841 3011 ntBASIC15.43■□□□□ 0.06
TRBC1P01850 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRBC1P01850 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBC1P01850 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBC1P01850 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBC1P01850 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBC1P01850 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBC1P01850 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBC1P01850 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBC1P01850 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRBC1P01850 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBC1P01850 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBC1P01850 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
TRBC1P01850 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBC1P01850 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBC1P01850 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRBC1P01850 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBC1P01850 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRBC1P01850 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBC1P01850 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBC1P01850 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBC1P01850 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBC1P01850 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.42■□□□□ 0.06
TRBC1P01850 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBC1P01850 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBC1P01850 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBC1P01850 AL512384.1-201ENST00000406683 331 ntBASIC15.42■□□□□ 0.06
TRBC1P01850 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
TRBC1P01850 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBC1P01850 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBC1P01850 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBC1P01850 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBC1P01850 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBC1P01850 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.42■□□□□ 0.06
TRBC1P01850 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
TRBC1P01850 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBC1P01850 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBC1P01850 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBC1P01850 AP001063.1-201ENST00000568332 529 ntBASIC15.42■□□□□ 0.06
TRBC1P01850 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.42■□□□□ 0.06
TRBC1P01850 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBC1P01850 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.42■□□□□ 0.06
TRBC1P01850 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBC1P01850 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBC1P01850 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBC1P01850 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBC1P01850 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
TRBC1P01850 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBC1P01850 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBC1P01850 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBC1P01850 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBC1P01850 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBC1P01850 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBC1P01850 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBC1P01850 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBC1P01850 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBC1P01850 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRBC1P01850 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBC1P01850 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBC1P01850 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBC1P01850 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBC1P01850 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRBC1P01850 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBC1P01850 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBC1P01850 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBC1P01850 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBC1P01850 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBC1P01850 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBC1P01850 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRBC1P01850 MST1L-201ENST00000442552 2185 ntBASIC15.41■□□□□ 0.06
TRBC1P01850 AC006486.2-201ENST00000624246 2199 ntBASIC15.41■□□□□ 0.06
TRBC1P01850 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBC1P01850 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRBC1P01850 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.41■□□□□ 0.06
TRBC1P01850 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRBC1P01850 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBC1P01850 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.41■□□□□ 0.06
TRBC1P01850 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBC1P01850 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBC1P01850 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBC1P01850 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.41■□□□□ 0.06
TRBC1P01850 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms