Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLSTN1O94985 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.19■□□□□ 0.34
CLSTN1O94985 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.19■□□□□ 0.34
CLSTN1O94985 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLSTN1O94985 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLSTN1O94985 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLSTN1O94985 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.19■□□□□ 0.34
CLSTN1O94985 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLSTN1O94985 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CLSTN1O94985 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLSTN1O94985 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.19■□□□□ 0.34
CLSTN1O94985 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLSTN1O94985 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLSTN1O94985 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CLSTN1O94985 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLSTN1O94985 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLSTN1O94985 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CLSTN1O94985 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLSTN1O94985 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CLSTN1O94985 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLSTN1O94985 DBET-201ENST00000630918 3363 ntBASIC17.19■□□□□ 0.34
CLSTN1O94985 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLSTN1O94985 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CLSTN1O94985 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 AC006486.2-201ENST00000624246 2199 ntBASIC17.18■□□□□ 0.34
CLSTN1O94985 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CLSTN1O94985 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.18■□□□□ 0.34
CLSTN1O94985 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.18■□□□□ 0.34
CLSTN1O94985 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CLSTN1O94985 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.18■□□□□ 0.34
CLSTN1O94985 AL080243.2-201ENST00000418783 582 ntBASIC17.18■□□□□ 0.34
CLSTN1O94985 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.18■□□□□ 0.34
CLSTN1O94985 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.18■□□□□ 0.34
CLSTN1O94985 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.18■□□□□ 0.34
CLSTN1O94985 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.18■□□□□ 0.34
CLSTN1O94985 HLA-V-204ENST00000476601 1289 ntBASIC17.18■□□□□ 0.34
CLSTN1O94985 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
CLSTN1O94985 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 AC015911.4-201ENST00000588022 1070 ntBASIC17.18■□□□□ 0.34
CLSTN1O94985 TEX28P1-201ENST00000613479 1221 ntBASIC17.18■□□□□ 0.34
CLSTN1O94985 TEX28P2-201ENST00000617764 1221 ntBASIC17.18■□□□□ 0.34
CLSTN1O94985 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CLSTN1O94985 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.18■□□□□ 0.34
CLSTN1O94985 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 AC100757.3-201ENST00000622361 1406 ntBASIC17.18■□□□□ 0.34
CLSTN1O94985 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLSTN1O94985 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CLSTN1O94985 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLSTN1O94985 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLSTN1O94985 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.17■□□□□ 0.34
CLSTN1O94985 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
CLSTN1O94985 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CLSTN1O94985 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CLSTN1O94985 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CLSTN1O94985 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.17■□□□□ 0.34
CLSTN1O94985 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CLSTN1O94985 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLSTN1O94985 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.17■□□□□ 0.34
CLSTN1O94985 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLSTN1O94985 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CLSTN1O94985 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLSTN1O94985 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLSTN1O94985 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLSTN1O94985 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CLSTN1O94985 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLSTN1O94985 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLSTN1O94985 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.17■□□□□ 0.34
CLSTN1O94985 AC241585.1-201ENST00000433527 519 ntBASIC17.17■□□□□ 0.34
CLSTN1O94985 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.17■□□□□ 0.34
CLSTN1O94985 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.17■□□□□ 0.34
CLSTN1O94985 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.17■□□□□ 0.34
CLSTN1O94985 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLSTN1O94985 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.17■□□□□ 0.34
CLSTN1O94985 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.17■□□□□ 0.34
CLSTN1O94985 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.17■□□□□ 0.34
CLSTN1O94985 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLSTN1O94985 AC011477.6-201ENST00000604980 1927 ntBASIC17.17■□□□□ 0.34
CLSTN1O94985 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CLSTN1O94985 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.17■□□□□ 0.34
CLSTN1O94985 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CLSTN1O94985 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms