Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SLC43A1O75387 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
SLC43A1O75387 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC43A1O75387 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC43A1O75387 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SLC43A1O75387 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC43A1O75387 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SLC43A1O75387 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC43A1O75387 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC43A1O75387 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC43A1O75387 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC43A1O75387 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC43A1O75387 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SLC43A1O75387 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC43A1O75387 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC43A1O75387 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
SLC43A1O75387 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC43A1O75387 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC43A1O75387 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC43A1O75387 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC43A1O75387 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.06□□□□□ -0.16
SLC43A1O75387 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.06□□□□□ -0.16
SLC43A1O75387 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.06□□□□□ -0.16
SLC43A1O75387 AC092580.3-201ENST00000430932 139 ntBASIC14.06□□□□□ -0.16
SLC43A1O75387 AC055876.3-201ENST00000431496 288 ntBASIC14.06□□□□□ -0.16
SLC43A1O75387 AC241585.1-201ENST00000433527 519 ntBASIC14.06□□□□□ -0.16
SLC43A1O75387 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.06□□□□□ -0.16
SLC43A1O75387 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SLC43A1O75387 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC43A1O75387 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
SLC43A1O75387 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC43A1O75387 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC43A1O75387 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.06□□□□□ -0.16
SLC43A1O75387 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.06□□□□□ -0.16
SLC43A1O75387 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.06□□□□□ -0.16
SLC43A1O75387 MIR4313-201ENST00000580760 101 ntBASIC14.06□□□□□ -0.16
SLC43A1O75387 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 AC138649.4-201ENST00000612222 287 ntBASIC14.06□□□□□ -0.16
SLC43A1O75387 AL390754.1-201ENST00000619088 582 ntBASIC14.06□□□□□ -0.16
SLC43A1O75387 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SLC43A1O75387 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SLC43A1O75387 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC43A1O75387 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC43A1O75387 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 AC087499.5-201ENST00000452760 1342 ntBASIC14.06□□□□□ -0.16
SLC43A1O75387 AC091951.1-201ENST00000512854 2465 ntBASIC14.06□□□□□ -0.16
SLC43A1O75387 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC43A1O75387 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC43A1O75387 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.06□□□□□ -0.16
SLC43A1O75387 AC100757.3-201ENST00000622361 1406 ntBASIC14.06□□□□□ -0.16
SLC43A1O75387 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC43A1O75387 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC43A1O75387 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.05□□□□□ -0.16
SLC43A1O75387 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SLC43A1O75387 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLC43A1O75387 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.05□□□□□ -0.16
SLC43A1O75387 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
SLC43A1O75387 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.05□□□□□ -0.16
SLC43A1O75387 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC43A1O75387 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SLC43A1O75387 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SLC43A1O75387 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC43A1O75387 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC43A1O75387 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC43A1O75387 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC43A1O75387 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC43A1O75387 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC43A1O75387 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC43A1O75387 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLC43A1O75387 AC136604.1-201ENST00000418535 575 ntBASIC14.05□□□□□ -0.16
SLC43A1O75387 AL512638.1-201ENST00000457493 794 ntBASIC14.05□□□□□ -0.16
SLC43A1O75387 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.05□□□□□ -0.16
SLC43A1O75387 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms