Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 AL589739.1-201ENST00000607720 493 ntBASIC13.85□□□□□ -0.19
TVP23AA6NH52 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.85□□□□□ -0.19
TVP23AA6NH52 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TVP23AA6NH52 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TVP23AA6NH52 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TVP23AA6NH52 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.85□□□□□ -0.19
TVP23AA6NH52 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.85□□□□□ -0.19
TVP23AA6NH52 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.85□□□□□ -0.19
TVP23AA6NH52 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.85□□□□□ -0.19
TVP23AA6NH52 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TVP23AA6NH52 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TVP23AA6NH52 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TVP23AA6NH52 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TVP23AA6NH52 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
TVP23AA6NH52 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TVP23AA6NH52 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.85□□□□□ -0.19
TVP23AA6NH52 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TVP23AA6NH52 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TVP23AA6NH52 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TVP23AA6NH52 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.85□□□□□ -0.19
TVP23AA6NH52 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TVP23AA6NH52 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.84□□□□□ -0.19
TVP23AA6NH52 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TVP23AA6NH52 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TVP23AA6NH52 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 AC023908.3-201ENST00000564211 3047 ntBASIC13.84□□□□□ -0.19
TVP23AA6NH52 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
TVP23AA6NH52 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.84□□□□□ -0.19
TVP23AA6NH52 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 RPL5P21-201ENST00000404620 815 ntBASIC13.84□□□□□ -0.19
TVP23AA6NH52 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.84□□□□□ -0.19
TVP23AA6NH52 AC074338.1-201ENST00000416825 156 ntBASIC13.84□□□□□ -0.19
TVP23AA6NH52 UPF3AP3-201ENST00000420996 769 ntBASIC13.84□□□□□ -0.19
TVP23AA6NH52 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.84□□□□□ -0.19
TVP23AA6NH52 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.84□□□□□ -0.19
TVP23AA6NH52 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.84□□□□□ -0.19
TVP23AA6NH52 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.84□□□□□ -0.19
TVP23AA6NH52 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.84□□□□□ -0.19
TVP23AA6NH52 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.84□□□□□ -0.19
TVP23AA6NH52 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TVP23AA6NH52 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
TVP23AA6NH52 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.84□□□□□ -0.19
TVP23AA6NH52 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TVP23AA6NH52 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.84□□□□□ -0.19
TVP23AA6NH52 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TVP23AA6NH52 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TVP23AA6NH52 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.83□□□□□ -0.19
TVP23AA6NH52 LINC00552-201ENST00000625151 2579 ntBASIC13.83□□□□□ -0.19
TVP23AA6NH52 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TVP23AA6NH52 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TVP23AA6NH52 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
TVP23AA6NH52 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
TVP23AA6NH52 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TVP23AA6NH52 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
TVP23AA6NH52 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.83□□□□□ -0.2
TVP23AA6NH52 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.83□□□□□ -0.2
TVP23AA6NH52 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TVP23AA6NH52 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TVP23AA6NH52 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TVP23AA6NH52 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.83□□□□□ -0.2
TVP23AA6NH52 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TVP23AA6NH52 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
TVP23AA6NH52 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TVP23AA6NH52 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.83□□□□□ -0.2
TVP23AA6NH52 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TVP23AA6NH52 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TVP23AA6NH52 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TVP23AA6NH52 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TVP23AA6NH52 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TVP23AA6NH52 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TVP23AA6NH52 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
TVP23AA6NH52 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.83□□□□□ -0.2
TVP23AA6NH52 KRT18P64-201ENST00000434946 1219 ntBASIC13.83□□□□□ -0.2
TVP23AA6NH52 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms