Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.64■□□□□ 0.58
DDX49Q9Y6V7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
DDX49Q9Y6V7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
DDX49Q9Y6V7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
DDX49Q9Y6V7 AL390755.1-201ENST00000623716 2027 ntBASIC18.64■□□□□ 0.58
DDX49Q9Y6V7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 HLA-V-204ENST00000476601 1289 ntBASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 AL662799.1-202ENST00000614205 422 ntBASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.64■□□□□ 0.57
DDX49Q9Y6V7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 GNAQP1-201ENST00000444815 1067 ntBASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 AC098859.1-201ENST00000502915 1238 ntBASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 AC009090.5-201ENST00000624886 2285 ntBASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX49Q9Y6V7 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 OR2I1P-209ENST00000641730 5365 ntBASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 AL080243.2-201ENST00000418783 582 ntBASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 AL353705.2-201ENST00000428243 662 ntBASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
DDX49Q9Y6V7 SPDYE22P-201ENST00000582158 798 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms