Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 AC091804.1-201ENST00000486888 567 ntBASIC16■□□□□ 0.15
DNMT3BQ9UBC3 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 AL021578.1-201ENST00000613646 709 ntBASIC16■□□□□ 0.15
DNMT3BQ9UBC3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16■□□□□ 0.15
DNMT3BQ9UBC3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 BX284668.4-201ENST00000453917 508 ntBASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 COX5BP1-201ENST00000507622 393 ntBASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 SCARNA20.5-201ENST00000516991 142 ntBASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 RHOQP1-201ENST00000555758 579 ntBASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
DNMT3BQ9UBC3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 POM121L8P-201ENST00000417732 1281 ntBASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 POM121L10P-201ENST00000436994 1285 ntBASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 POM121L9P-203ENST00000441984 1285 ntBASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 AC005077.2-201ENST00000449786 690 ntBASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 SAMD11P1-201ENST00000571429 661 ntBASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
DNMT3BQ9UBC3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms