Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 DRD5P1-201ENST00000456605 1438 ntBASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 LINC01230-201ENST00000625222 3017 ntBASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO3Q9BXY4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 AC241585.1-201ENST00000433527 519 ntBASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 MEIS3P1-201ENST00000495167 958 ntBASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 KRT18P28-201ENST00000453838 1332 ntBASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 AC093525.8-201ENST00000624099 1342 ntBASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 AC023090.2-201ENST00000625182 2110 ntBASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO3Q9BXY4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms