Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 AC126365.1-201ENST00000578585 1514 ntBASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 TCAF2P1-201ENST00000291129 2421 ntBASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 AC026410.3-201ENST00000514280 936 ntBASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 AC079316.1-201ENST00000548397 411 ntBASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RPAP1Q9BWH6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 MSTO2P-201ENST00000314835 1709 ntBASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 MIR6787-201ENST00000616675 61 ntBASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPAP1Q9BWH6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RPAP1Q9BWH6 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.64■□□□□ 0.58
RPAP1Q9BWH6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.64■□□□□ 0.58
RPAP1Q9BWH6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RPAP1Q9BWH6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RPAP1Q9BWH6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RPAP1Q9BWH6 AL136379.1-201ENST00000623471 2642 ntBASIC18.64■□□□□ 0.57
RPAP1Q9BWH6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPAP1Q9BWH6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RPAP1Q9BWH6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPAP1Q9BWH6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms