Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.4□□□□□ -0.42
RNF2Q99496 AC008267.7-201ENST00000624570 1194 ntBASIC12.4□□□□□ -0.42
RNF2Q99496 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
RNF2Q99496 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RNF2Q99496 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.4□□□□□ -0.42
RNF2Q99496 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
RNF2Q99496 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.4□□□□□ -0.42
RNF2Q99496 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
RNF2Q99496 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RNF2Q99496 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RNF2Q99496 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.4□□□□□ -0.42
RNF2Q99496 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
RNF2Q99496 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
RNF2Q99496 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.4□□□□□ -0.42
RNF2Q99496 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RNF2Q99496 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.4□□□□□ -0.42
RNF2Q99496 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RNF2Q99496 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RNF2Q99496 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.4□□□□□ -0.42
RNF2Q99496 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
RNF2Q99496 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RNF2Q99496 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RNF2Q99496 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RNF2Q99496 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
RNF2Q99496 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.43
RNF2Q99496 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.4□□□□□ -0.43
RNF2Q99496 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
RNF2Q99496 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
RNF2Q99496 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.39□□□□□ -0.43
RNF2Q99496 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 AC127383.1-201ENST00000444697 1800 ntBASIC12.39□□□□□ -0.43
RNF2Q99496 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.39□□□□□ -0.43
RNF2Q99496 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.39□□□□□ -0.43
RNF2Q99496 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.39□□□□□ -0.43
RNF2Q99496 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 RPSAP43-201ENST00000402237 625 ntBASIC12.39□□□□□ -0.43
RNF2Q99496 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
RNF2Q99496 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.39□□□□□ -0.43
RNF2Q99496 UPF3AP3-201ENST00000420996 769 ntBASIC12.39□□□□□ -0.43
RNF2Q99496 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.39□□□□□ -0.43
RNF2Q99496 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.39□□□□□ -0.43
RNF2Q99496 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.39□□□□□ -0.43
RNF2Q99496 AC112482.1-201ENST00000492080 688 ntBASIC12.39□□□□□ -0.43
RNF2Q99496 AC079140.1-201ENST00000508039 487 ntBASIC12.39□□□□□ -0.43
RNF2Q99496 IGHV3-62-201ENST00000520057 340 ntBASIC12.39□□□□□ -0.43
RNF2Q99496 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.39□□□□□ -0.43
RNF2Q99496 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.39□□□□□ -0.43
RNF2Q99496 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.39□□□□□ -0.43
RNF2Q99496 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.39□□□□□ -0.43
RNF2Q99496 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.39□□□□□ -0.43
RNF2Q99496 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.39□□□□□ -0.43
RNF2Q99496 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.39□□□□□ -0.43
RNF2Q99496 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.39□□□□□ -0.43
RNF2Q99496 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.39□□□□□ -0.43
RNF2Q99496 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.39□□□□□ -0.43
RNF2Q99496 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.39□□□□□ -0.43
RNF2Q99496 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.39□□□□□ -0.43
RNF2Q99496 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.39□□□□□ -0.43
RNF2Q99496 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
RNF2Q99496 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.39□□□□□ -0.43
RNF2Q99496 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
RNF2Q99496 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RNF2Q99496 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
RNF2Q99496 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.38□□□□□ -0.43
RNF2Q99496 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.38□□□□□ -0.43
RNF2Q99496 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.38□□□□□ -0.43
RNF2Q99496 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RNF2Q99496 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.38□□□□□ -0.43
RNF2Q99496 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
RNF2Q99496 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms