Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.66■□□□□ 0.1
PHOX2BQ99453 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC15.66■□□□□ 0.1
PHOX2BQ99453 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 AC022217.1-201ENST00000521069 738 ntBASIC15.66■□□□□ 0.1
PHOX2BQ99453 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PHOX2BQ99453 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.66■□□□□ 0.1
PHOX2BQ99453 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.66■□□□□ 0.1
PHOX2BQ99453 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.66■□□□□ 0.1
PHOX2BQ99453 AC079791.1-201ENST00000605356 973 ntBASIC15.66■□□□□ 0.1
PHOX2BQ99453 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PHOX2BQ99453 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PHOX2BQ99453 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.66■□□□□ 0.1
PHOX2BQ99453 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHOX2BQ99453 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 AC023824.1-201ENST00000562945 2975 ntBASIC15.65■□□□□ 0.1
PHOX2BQ99453 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 AL138709.1-201ENST00000614840 1693 ntBASIC15.65■□□□□ 0.1
PHOX2BQ99453 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 ACKR1-201ENST00000368121 1240 ntBASIC15.65■□□□□ 0.1
PHOX2BQ99453 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 AC092171.5-201ENST00000608012 942 ntBASIC15.65■□□□□ 0.1
PHOX2BQ99453 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 AC006453.4-201ENST00000636949 1252 ntBASIC15.65■□□□□ 0.1
PHOX2BQ99453 AL805961.1-201ENST00000642026 753 ntBASIC15.65■□□□□ 0.1
PHOX2BQ99453 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 AL023775.1-201ENST00000454907 1746 ntBASIC15.65■□□□□ 0.1
PHOX2BQ99453 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.65■□□□□ 0.1
PHOX2BQ99453 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHOX2BQ99453 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
PHOX2BQ99453 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PHOX2BQ99453 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHOX2BQ99453 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHOX2BQ99453 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHOX2BQ99453 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHOX2BQ99453 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.64■□□□□ 0.09
PHOX2BQ99453 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHOX2BQ99453 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHOX2BQ99453 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHOX2BQ99453 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHOX2BQ99453 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHOX2BQ99453 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.64■□□□□ 0.09
PHOX2BQ99453 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PHOX2BQ99453 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.64■□□□□ 0.09
PHOX2BQ99453 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.64■□□□□ 0.09
PHOX2BQ99453 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHOX2BQ99453 CEP164P1-201ENST00000455142 418 ntBASIC15.64■□□□□ 0.09
PHOX2BQ99453 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms