Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC1A1P43005 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A1P43005 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A1P43005 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A1P43005 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC1A1P43005 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A1P43005 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC1A1P43005 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SLC1A1P43005 AC027369.6-201ENST00000525520 931 ntBASIC16.18■□□□□ 0.18
SLC1A1P43005 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC1A1P43005 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC1A1P43005 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A1P43005 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC1A1P43005 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC1A1P43005 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC1A1P43005 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC1A1P43005 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC1A1P43005 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC1A1P43005 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC1A1P43005 CICP14-201ENST00000629111 2732 ntBASIC16.18■□□□□ 0.18
SLC1A1P43005 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
SLC1A1P43005 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC1A1P43005 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC1A1P43005 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SLC1A1P43005 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC1A1P43005 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A1P43005 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SLC1A1P43005 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A1P43005 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A1P43005 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SLC1A1P43005 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SLC1A1P43005 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A1P43005 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A1P43005 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A1P43005 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A1P43005 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A1P43005 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A1P43005 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A1P43005 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A1P43005 AC107890.1-201ENST00000422478 521 ntBASIC16.17■□□□□ 0.18
SLC1A1P43005 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.17■□□□□ 0.18
SLC1A1P43005 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC1A1P43005 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC1A1P43005 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SLC1A1P43005 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC1A1P43005 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC1A1P43005 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SLC1A1P43005 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
SLC1A1P43005 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC1A1P43005 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A1P43005 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SLC1A1P43005 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A1P43005 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A1P43005 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC1A1P43005 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A1P43005 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SLC1A1P43005 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A1P43005 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A1P43005 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A1P43005 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC1A1P43005 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC1A1P43005 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC1A1P43005 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 MYO15B-237ENST00000642007 4893 ntBASIC16.16■□□□□ 0.18
SLC1A1P43005 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SLC1A1P43005 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC1A1P43005 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC1A1P43005 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC1A1P43005 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC1A1P43005 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC1A1P43005 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 AC067863.1-201ENST00000494933 530 ntBASIC16.16■□□□□ 0.18
SLC1A1P43005 TIMM17BP1-201ENST00000545713 516 ntBASIC16.16■□□□□ 0.18
SLC1A1P43005 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SLC1A1P43005 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 AC004449.1-201ENST00000564240 433 ntBASIC16.16■□□□□ 0.18
SLC1A1P43005 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC1A1P43005 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.16■□□□□ 0.18
SLC1A1P43005 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC1A1P43005 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SLC1A1P43005 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
SLC1A1P43005 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC1A1P43005 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SLC1A1P43005 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC1A1P43005 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms