Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TCF4P15884 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.1■□□□□ 0.17
TCF4P15884 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
TCF4P15884 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.1■□□□□ 0.17
TCF4P15884 CYMP-203ENST00000474680 1263 ntBASIC16.1■□□□□ 0.17
TCF4P15884 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
TCF4P15884 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.1■□□□□ 0.17
TCF4P15884 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.1■□□□□ 0.17
TCF4P15884 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.1■□□□□ 0.17
TCF4P15884 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.1■□□□□ 0.17
TCF4P15884 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.1■□□□□ 0.17
TCF4P15884 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.1■□□□□ 0.17
TCF4P15884 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.1■□□□□ 0.17
TCF4P15884 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.1■□□□□ 0.17
TCF4P15884 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.1■□□□□ 0.17
TCF4P15884 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 AL136379.1-201ENST00000623471 2642 ntBASIC16.1■□□□□ 0.17
TCF4P15884 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
TCF4P15884 LINC01101-201ENST00000622953 1884 ntBASIC16.1■□□□□ 0.17
TCF4P15884 CICP14-201ENST00000629111 2732 ntBASIC16.1■□□□□ 0.17
TCF4P15884 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.1■□□□□ 0.17
TCF4P15884 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCF4P15884 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCF4P15884 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.09■□□□□ 0.17
TCF4P15884 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TCF4P15884 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TCF4P15884 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.09■□□□□ 0.17
TCF4P15884 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.09■□□□□ 0.17
TCF4P15884 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TCF4P15884 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TCF4P15884 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCF4P15884 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCF4P15884 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.09■□□□□ 0.17
TCF4P15884 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCF4P15884 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.09■□□□□ 0.17
TCF4P15884 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TCF4P15884 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
TCF4P15884 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.09■□□□□ 0.17
TCF4P15884 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.09■□□□□ 0.17
TCF4P15884 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
TCF4P15884 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.09■□□□□ 0.17
TCF4P15884 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCF4P15884 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.09■□□□□ 0.17
TCF4P15884 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.09■□□□□ 0.17
TCF4P15884 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.09■□□□□ 0.17
TCF4P15884 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.09■□□□□ 0.17
TCF4P15884 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TCF4P15884 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.09■□□□□ 0.17
TCF4P15884 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TCF4P15884 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCF4P15884 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TCF4P15884 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.09■□□□□ 0.17
TCF4P15884 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TCF4P15884 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TCF4P15884 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCF4P15884 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TCF4P15884 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCF4P15884 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCF4P15884 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCF4P15884 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.09■□□□□ 0.17
TCF4P15884 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.09■□□□□ 0.17
TCF4P15884 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCF4P15884 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCF4P15884 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.09■□□□□ 0.17
TCF4P15884 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TCF4P15884 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCF4P15884 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TCF4P15884 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
TCF4P15884 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TCF4P15884 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TCF4P15884 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TCF4P15884 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TCF4P15884 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TCF4P15884 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.08■□□□□ 0.17
TCF4P15884 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TCF4P15884 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
TCF4P15884 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TCF4P15884 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TCF4P15884 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TCF4P15884 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TCF4P15884 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TCF4P15884 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TCF4P15884 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms