Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC17.69■□□□□ 0.42
TPM2P07951 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM2P07951 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM2P07951 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TPM2P07951 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM2P07951 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM2P07951 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
TPM2P07951 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM2P07951 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.69■□□□□ 0.42
TPM2P07951 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TPM2P07951 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TPM2P07951 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TPM2P07951 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM2P07951 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM2P07951 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TPM2P07951 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TPM2P07951 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TPM2P07951 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM2P07951 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM2P07951 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM2P07951 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM2P07951 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TPM2P07951 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC17.68■□□□□ 0.42
TPM2P07951 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TPM2P07951 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM2P07951 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
TPM2P07951 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TPM2P07951 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TPM2P07951 AC002056.1-201ENST00000395613 760 ntBASIC17.68■□□□□ 0.42
TPM2P07951 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM2P07951 CES1P1-201ENST00000421606 1704 ntBASIC17.68■□□□□ 0.42
TPM2P07951 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.68■□□□□ 0.42
TPM2P07951 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TPM2P07951 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM2P07951 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.68■□□□□ 0.42
TPM2P07951 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM2P07951 AC024267.1-201ENST00000582320 895 ntBASIC17.68■□□□□ 0.42
TPM2P07951 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM2P07951 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.68■□□□□ 0.42
TPM2P07951 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC17.68■□□□□ 0.42
TPM2P07951 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TPM2P07951 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM2P07951 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM2P07951 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM2P07951 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TPM2P07951 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TPM2P07951 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM2P07951 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.68■□□□□ 0.42
TPM2P07951 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM2P07951 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM2P07951 PID1-202ENST00000392054 2745 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM2P07951 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM2P07951 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM2P07951 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TPM2P07951 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TPM2P07951 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM2P07951 ABR-205ENST00000544583 5595 ntTSL 2 BASIC17.67■□□□□ 0.42
TPM2P07951 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM2P07951 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.67■□□□□ 0.42
TPM2P07951 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM2P07951 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.67■□□□□ 0.42
TPM2P07951 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TPM2P07951 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.67■□□□□ 0.42
TPM2P07951 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC17.67■□□□□ 0.42
TPM2P07951 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.67■□□□□ 0.42
TPM2P07951 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM2P07951 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM2P07951 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TPM2P07951 MRPL3P1-201ENST00000400109 1033 ntBASIC17.67■□□□□ 0.42
TPM2P07951 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.67■□□□□ 0.42
TPM2P07951 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.67■□□□□ 0.42
TPM2P07951 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TPM2P07951 KRT19P2-202ENST00000557173 1012 ntBASIC17.67■□□□□ 0.42
TPM2P07951 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TPM2P07951 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.67■□□□□ 0.42
TPM2P07951 AC068137.2-201ENST00000605408 478 ntBASIC17.67■□□□□ 0.42
TPM2P07951 AC064836.3-201ENST00000607928 673 ntBASIC17.67■□□□□ 0.42
TPM2P07951 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TPM2P07951 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.67■□□□□ 0.42
TPM2P07951 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC17.67■□□□□ 0.42
TPM2P07951 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM2P07951 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM2P07951 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.67■□□□□ 0.42
TPM2P07951 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM2P07951 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM2P07951 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM2P07951 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM2P07951 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC17.67■□□□□ 0.42
TPM2P07951 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.67■□□□□ 0.42
TPM2P07951 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TPM2P07951 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM2P07951 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM2P07951 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM2P07951 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM2P07951 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM2P07951 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM2P07951 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.67■□□□□ 0.42
TPM2P07951 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM2P07951 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TPM2P07951 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms