Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 SKA2-202ENST00000437036 625 ntTSL 2 BASIC19.81■□□□□ 0.76
COL5A2P05997 CICP12-201ENST00000455801 843 ntBASIC19.81■□□□□ 0.76
COL5A2P05997 AC008723.1-201ENST00000506922 207 ntBASIC19.81■□□□□ 0.76
COL5A2P05997 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC19.81■□□□□ 0.76
COL5A2P05997 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC19.81■□□□□ 0.76
COL5A2P05997 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
COL5A2P05997 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
COL5A2P05997 NAT9-220ENST00000582870 896 ntTSL 5 BASIC19.81■□□□□ 0.76
COL5A2P05997 AC127024.7-201ENST00000625101 200 ntBASIC19.81■□□□□ 0.76
COL5A2P05997 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL5A2P05997 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL5A2P05997 AL359258.3-201ENST00000622910 2331 ntBASIC19.81■□□□□ 0.76
COL5A2P05997 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL5A2P05997 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL5A2P05997 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL5A2P05997 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL5A2P05997 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL5A2P05997 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL5A2P05997 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
COL5A2P05997 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
COL5A2P05997 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL5A2P05997 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
COL5A2P05997 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL5A2P05997 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL5A2P05997 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL5A2P05997 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL5A2P05997 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL5A2P05997 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL5A2P05997 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
COL5A2P05997 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC19.8■□□□□ 0.76
COL5A2P05997 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
COL5A2P05997 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC19.8■□□□□ 0.76
COL5A2P05997 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL5A2P05997 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC19.8■□□□□ 0.76
COL5A2P05997 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC19.8■□□□□ 0.76
COL5A2P05997 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL5A2P05997 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC19.8■□□□□ 0.76
COL5A2P05997 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL5A2P05997 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.8■□□□□ 0.76
COL5A2P05997 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL5A2P05997 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL5A2P05997 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL5A2P05997 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL5A2P05997 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.8■□□□□ 0.76
COL5A2P05997 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL5A2P05997 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC19.8■□□□□ 0.76
COL5A2P05997 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
COL5A2P05997 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL5A2P05997 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC19.8■□□□□ 0.76
COL5A2P05997 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL5A2P05997 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL5A2P05997 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL5A2P05997 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC19.79■□□□□ 0.76
COL5A2P05997 AP000358.1-201ENST00000456260 156 ntBASIC19.79■□□□□ 0.76
COL5A2P05997 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC19.79■□□□□ 0.76
COL5A2P05997 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL5A2P05997 MIR4522-201ENST00000584932 87 ntBASIC19.79■□□□□ 0.76
COL5A2P05997 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
COL5A2P05997 MIR6858-201ENST00000620733 67 ntBASIC19.79■□□□□ 0.76
COL5A2P05997 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
COL5A2P05997 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL5A2P05997 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL5A2P05997 AC144522.1-201ENST00000625111 1658 ntBASIC19.79■□□□□ 0.76
COL5A2P05997 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL5A2P05997 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
COL5A2P05997 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL5A2P05997 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
COL5A2P05997 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL5A2P05997 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
COL5A2P05997 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
COL5A2P05997 AC015909.3-201ENST00000572855 1794 ntBASIC19.79■□□□□ 0.76
COL5A2P05997 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL5A2P05997 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL5A2P05997 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL5A2P05997 AC099398.1-201ENST00000567919 2776 ntBASIC19.79■□□□□ 0.76
COL5A2P05997 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL5A2P05997 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL5A2P05997 AC026320.2-201ENST00000434379 478 ntBASIC19.79■□□□□ 0.76
COL5A2P05997 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC19.79■□□□□ 0.76
COL5A2P05997 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
COL5A2P05997 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
COL5A2P05997 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC19.79■□□□□ 0.76
COL5A2P05997 CMC2-224ENST00000630396 481 ntTSL 5 BASIC19.79■□□□□ 0.76
COL5A2P05997 DDX5-235ENST00000630471 473 ntTSL 4 BASIC19.79■□□□□ 0.76
COL5A2P05997 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL5A2P05997 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
COL5A2P05997 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.78■□□□□ 0.76
COL5A2P05997 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
COL5A2P05997 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL5A2P05997 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC19.78■□□□□ 0.76
COL5A2P05997 STK26-204ENST00000481105 1835 ntTSL 2 BASIC19.78■□□□□ 0.76
COL5A2P05997 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL5A2P05997 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL5A2P05997 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL5A2P05997 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC19.78■□□□□ 0.76
COL5A2P05997 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL5A2P05997 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC19.78■□□□□ 0.76
COL5A2P05997 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC19.78■□□□□ 0.76
COL5A2P05997 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.78■□□□□ 0.76
COL5A2P05997 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms