Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.76□□□□□ -0.21
SGCEO43556 AC006538.3-201ENST00000612495 578 ntBASIC13.76□□□□□ -0.21
SGCEO43556 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
SGCEO43556 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.76□□□□□ -0.21
SGCEO43556 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.76□□□□□ -0.21
SGCEO43556 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
SGCEO43556 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.76□□□□□ -0.21
SGCEO43556 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.76□□□□□ -0.21
SGCEO43556 AC087386.2-201ENST00000623212 4637 ntBASIC13.76□□□□□ -0.21
SGCEO43556 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SGCEO43556 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.76□□□□□ -0.21
SGCEO43556 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.76□□□□□ -0.21
SGCEO43556 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.76□□□□□ -0.21
SGCEO43556 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SGCEO43556 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.76□□□□□ -0.21
SGCEO43556 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.76□□□□□ -0.21
SGCEO43556 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SGCEO43556 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SGCEO43556 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
SGCEO43556 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SGCEO43556 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SGCEO43556 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SGCEO43556 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.76□□□□□ -0.21
SGCEO43556 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SGCEO43556 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.76□□□□□ -0.21
SGCEO43556 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SGCEO43556 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SGCEO43556 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SGCEO43556 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SGCEO43556 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SGCEO43556 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.75□□□□□ -0.21
SGCEO43556 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SGCEO43556 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SGCEO43556 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SGCEO43556 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SGCEO43556 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.75□□□□□ -0.21
SGCEO43556 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SGCEO43556 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.75□□□□□ -0.21
SGCEO43556 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SGCEO43556 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.75□□□□□ -0.21
SGCEO43556 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SGCEO43556 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SGCEO43556 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
SGCEO43556 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.75□□□□□ -0.21
SGCEO43556 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SGCEO43556 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.75□□□□□ -0.21
SGCEO43556 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.75□□□□□ -0.21
SGCEO43556 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SGCEO43556 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SGCEO43556 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SGCEO43556 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.75□□□□□ -0.21
SGCEO43556 TREML5P-201ENST00000421694 576 ntBASIC13.75□□□□□ -0.21
SGCEO43556 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.75□□□□□ -0.21
SGCEO43556 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.75□□□□□ -0.21
SGCEO43556 SLED1-202ENST00000512051 380 ntBASIC13.75□□□□□ -0.21
SGCEO43556 IGHV3-42-201ENST00000520410 361 ntBASIC13.75□□□□□ -0.21
SGCEO43556 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.75□□□□□ -0.21
SGCEO43556 AL512361.1-201ENST00000554200 418 ntBASIC13.75□□□□□ -0.21
SGCEO43556 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.75□□□□□ -0.21
SGCEO43556 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.75□□□□□ -0.21
SGCEO43556 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.75□□□□□ -0.21
SGCEO43556 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.75□□□□□ -0.21
SGCEO43556 AC025048.3-201ENST00000590609 569 ntBASIC13.75□□□□□ -0.21
SGCEO43556 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.75□□□□□ -0.21
SGCEO43556 GPALPP1-207ENST00000611650 899 ntBASIC13.75□□□□□ -0.21
SGCEO43556 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.75□□□□□ -0.21
SGCEO43556 AC005702.4-201ENST00000618393 416 ntBASIC13.75□□□□□ -0.21
SGCEO43556 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SGCEO43556 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SGCEO43556 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SGCEO43556 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SGCEO43556 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.75□□□□□ -0.21
SGCEO43556 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SGCEO43556 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.75□□□□□ -0.21
SGCEO43556 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SGCEO43556 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SGCEO43556 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.75□□□□□ -0.21
SGCEO43556 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
SGCEO43556 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.75□□□□□ -0.21
SGCEO43556 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SGCEO43556 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SGCEO43556 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SGCEO43556 Z97205.2-201ENST00000564697 1639 ntBASIC13.75□□□□□ -0.21
SGCEO43556 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SGCEO43556 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SGCEO43556 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SGCEO43556 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
SGCEO43556 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SGCEO43556 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SGCEO43556 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SGCEO43556 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.74□□□□□ -0.21
SGCEO43556 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.74□□□□□ -0.21
SGCEO43556 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.74□□□□□ -0.21
SGCEO43556 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.74□□□□□ -0.21
SGCEO43556 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SGCEO43556 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.74□□□□□ -0.21
SGCEO43556 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.74□□□□□ -0.21
SGCEO43556 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.74□□□□□ -0.21
SGCEO43556 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SGCEO43556 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms