Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
KPNA4O00629 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
KPNA4O00629 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.56□□□□□ -0.08
KPNA4O00629 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
KPNA4O00629 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
KPNA4O00629 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
KPNA4O00629 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KPNA4O00629 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
KPNA4O00629 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KPNA4O00629 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
KPNA4O00629 AL691432.1-201ENST00000596308 1422 ntBASIC14.56□□□□□ -0.08
KPNA4O00629 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
KPNA4O00629 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KPNA4O00629 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.56□□□□□ -0.08
KPNA4O00629 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
KPNA4O00629 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KPNA4O00629 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KPNA4O00629 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KPNA4O00629 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KPNA4O00629 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KPNA4O00629 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 CR383656.2-201ENST00000548656 2254 ntBASIC14.55□□□□□ -0.08
KPNA4O00629 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.55□□□□□ -0.08
KPNA4O00629 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
KPNA4O00629 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
KPNA4O00629 AL136982.4-201ENST00000437689 1740 ntBASIC14.55□□□□□ -0.08
KPNA4O00629 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.55□□□□□ -0.08
KPNA4O00629 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.55□□□□□ -0.08
KPNA4O00629 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.55□□□□□ -0.08
KPNA4O00629 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
KPNA4O00629 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.55□□□□□ -0.08
KPNA4O00629 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
KPNA4O00629 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.55□□□□□ -0.08
KPNA4O00629 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 KRT18P58-201ENST00000527480 1120 ntBASIC14.55□□□□□ -0.08
KPNA4O00629 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.55□□□□□ -0.08
KPNA4O00629 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.55□□□□□ -0.08
KPNA4O00629 AP000842.3-202ENST00000569238 1080 ntBASIC14.55□□□□□ -0.08
KPNA4O00629 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.55□□□□□ -0.08
KPNA4O00629 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.55□□□□□ -0.08
KPNA4O00629 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.55□□□□□ -0.08
KPNA4O00629 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.55□□□□□ -0.08
KPNA4O00629 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.55□□□□□ -0.08
KPNA4O00629 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.55□□□□□ -0.08
KPNA4O00629 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.55□□□□□ -0.08
KPNA4O00629 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
KPNA4O00629 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
KPNA4O00629 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
KPNA4O00629 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
KPNA4O00629 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
KPNA4O00629 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.55□□□□□ -0.08
KPNA4O00629 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.55□□□□□ -0.08
KPNA4O00629 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.55□□□□□ -0.08
KPNA4O00629 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
KPNA4O00629 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.55□□□□□ -0.08
KPNA4O00629 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KPNA4O00629 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
KPNA4O00629 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.54□□□□□ -0.08
KPNA4O00629 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
KPNA4O00629 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KPNA4O00629 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KPNA4O00629 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.54□□□□□ -0.08
KPNA4O00629 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KPNA4O00629 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
KPNA4O00629 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
KPNA4O00629 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KPNA4O00629 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.54□□□□□ -0.08
KPNA4O00629 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KPNA4O00629 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KPNA4O00629 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
KPNA4O00629 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KPNA4O00629 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KPNA4O00629 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KPNA4O00629 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms