Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC104692.2-201ENST00000603054 253 ntBASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 AC104109.2-201ENST00000602919 1418 ntBASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 AP000845.1-201ENST00000581677 2131 ntBASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
UBE2D4Q9Y2X8 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 MTHFR-210ENST00000641407 2387 ntBASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 MIR346-201ENST00000362234 95 ntBASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 MRPL3P1-201ENST00000400109 1033 ntBASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 AC007967.2-201ENST00000432613 625 ntBASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 AC034105.1-201ENST00000563488 319 ntBASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 AL513190.1-201ENST00000621254 727 ntBASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
UBE2D4Q9Y2X8 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 AC041040.2-201ENST00000622926 2899 ntBASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms