Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC10.85□□□□□ -0.67
UPK3BQ9BT76 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 AC063926.2-201ENST00000623766 1308 ntBASIC10.84□□□□□ -0.67
UPK3BQ9BT76 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 CU639417.3-201ENST00000624240 1404 ntBASIC10.84□□□□□ -0.67
UPK3BQ9BT76 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 FES-204ENST00000414248 2327 ntTSL 2 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 SNX18-202ENST00000343017 3140 ntBASIC10.84□□□□□ -0.67
UPK3BQ9BT76 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 TOMM22P5-201ENST00000416399 439 ntBASIC10.84□□□□□ -0.67
UPK3BQ9BT76 PNKD-204ENST00000436005 978 ntTSL 5 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 TARDBPP1-201ENST00000442013 1203 ntBASIC10.84□□□□□ -0.67
UPK3BQ9BT76 GAPDHP21-201ENST00000450301 1010 ntBASIC10.84□□□□□ -0.67
UPK3BQ9BT76 RN7SL692P-201ENST00000464677 288 ntBASIC10.84□□□□□ -0.67
UPK3BQ9BT76 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 HNRNPUP1-201ENST00000554987 333 ntBASIC10.84□□□□□ -0.67
UPK3BQ9BT76 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 AC036164.1-201ENST00000570544 333 ntBASIC10.84□□□□□ -0.67
UPK3BQ9BT76 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 AC004790.1-201ENST00000612686 536 ntBASIC10.84□□□□□ -0.67
UPK3BQ9BT76 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 AP002414.2-201ENST00000591780 3365 ntBASIC10.84□□□□□ -0.67
UPK3BQ9BT76 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC10.84□□□□□ -0.67
UPK3BQ9BT76 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms