Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 AL591122.2-201ENST00000624125 1853 ntBASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
MBD3L1Q8WWY6 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 AL731571.1-201ENST00000617058 5428 ntBASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 RPS8P6-201ENST00000426177 609 ntBASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 AC136632.2-201ENST00000512891 861 ntBASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 PRYP6-201ENST00000514804 343 ntBASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 MIR3180-1-201ENST00000580374 94 ntBASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 MIR3180-3-201ENST00000584616 94 ntBASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 AL009183.1-201ENST00000603760 355 ntBASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 KRT8P37-201ENST00000451609 1420 ntBASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MBD3L1Q8WWY6 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
MBD3L1Q8WWY6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms