Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 CACNA1C-212ENST00000399621 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 CACNA1C-215ENST00000399637 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 CACNA1C-216ENST00000399638 6595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 CACNA1C-221ENST00000402845 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 BBS10-201ENST00000393262 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 LINC00667-205ENST00000582008 3979 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 SUV39H1-201ENST00000337852 2978 ntTSL 2 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 PHF21A-202ENST00000418153 2730 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 FAM110B-201ENST00000361488 3438 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 AP006587.3-201ENST00000525742 1516 ntBASIC9.38□□□□□ -0.91
SVIPQ8NHG7 AL133367.1-201ENST00000568177 4063 ntBASIC9.38□□□□□ -0.91
SVIPQ8NHG7 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 AIG1-201ENST00000275235 1202 ntTSL 2 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 FAM98B-203ENST00000491535 3111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 LINC00606-201ENST00000412578 2869 ntTSL 2 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 CX3CL1-201ENST00000006053 3321 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 STRADA-231ENST00000638708 2153 ntTSL 2 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 FBXO8-201ENST00000393674 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 CTSK-201ENST00000271651 1692 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 TIMM17A-201ENST00000367287 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 C19orf44-201ENST00000221671 3427 ntAPPRIS P3 TSL 2 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 MIEF1-201ENST00000325301 5625 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC9.38□□□□□ -0.91
SVIPQ8NHG7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 TMCO4-201ENST00000294543 2974 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 KRT8P33-201ENST00000508125 1423 ntBASIC9.38□□□□□ -0.91
SVIPQ8NHG7 GRB2-205ENST00000392564 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 DNAJB8-202ENST00000469083 3365 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 PLAC8-203ENST00000426923 2253 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 DLG5-201ENST00000372391 7415 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 AC097634.1-201ENST00000604491 2467 ntBASIC9.38□□□□□ -0.91
SVIPQ8NHG7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 FAM86C2P-205ENST00000531806 1814 ntTSL 2 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 AC053503.6-201ENST00000623864 1843 ntBASIC9.38□□□□□ -0.91
SVIPQ8NHG7 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
SVIPQ8NHG7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 ZNF300-201ENST00000274599 3268 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 AL138688.1-201ENST00000624851 1594 ntBASIC9.37□□□□□ -0.91
SVIPQ8NHG7 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 CSPG4P12-201ENST00000558282 4853 ntBASIC9.37□□□□□ -0.91
SVIPQ8NHG7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 EPB41L2-232ENST00000628542 4247 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 PRAMEF13-202ENST00000638454 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 AL031590.1-202ENST00000641466 1737 ntBASIC9.37□□□□□ -0.91
SVIPQ8NHG7 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 CCDC144NL-AS1-207ENST00000577537 3727 ntTSL 2 BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 AOC2-201ENST00000253799 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC9.37□□□□□ -0.91
SVIPQ8NHG7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms