RNA–Protein interactions for RNA: ENST00000412578.1

LINC00606-201, long intergenic non-protein coding RNA 606, humanhuman

TSL 2 BASIC

Gene LINC00606, Length 2,869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00606-201ENST00000412578 NISCHQ9Y2I1 1504 aa21.53■■□□□ 1.04
LINC00606-201ENST00000412578 CCDC180Q9P1Z9 1646 aa18.55■□□□□ 0.56
LINC00606-201ENST00000412578 DCAF8L2P0C7V8 631 aa18.37■□□□□ 0.53
LINC00606-201ENST00000412578 SHROOM4Q9ULL8 1493 aa18.1■□□□□ 0.49
LINC00606-201ENST00000412578 ZCCHC6Q5VYS8 1495 aaKnown RBP18.04■□□□□ 0.48
LINC00606-201ENST00000412578 ABCC9O60706 1549 aa18.01■□□□□ 0.47
LINC00606-201ENST00000412578 DCAF1Q9Y4B6 1507 aa17.6■□□□□ 0.41
LINC00606-201ENST00000412578 SUPT5HO00267 1087 aaKnown RBP17.58■□□□□ 0.4
LINC00606-201ENST00000412578 NACADO15069 1562 aa17.39■□□□□ 0.38
LINC00606-201ENST00000412578 SCRIBQ14160 1630 aa17.39■□□□□ 0.37
LINC00606-201ENST00000412578 MYO15BQ96JP2 1530 aa17.35■□□□□ 0.37
LINC00606-201ENST00000412578 RB1CC1Q8TDY2 1594 aa17.3■□□□□ 0.36
LINC00606-201ENST00000412578 PABPN1Q86U42 306 aaKnown RBP eCLIP17.14■□□□□ 0.34
LINC00606-201ENST00000412578 CHIC1Q5VXU3 224 aa16.94■□□□□ 0.3
LINC00606-201ENST00000412578 UNC13AQ9UPW8 1703 aa16.89■□□□□ 0.3
LINC00606-201ENST00000412578 CECR2Q9BXF3 1484 aa16.89■□□□□ 0.29
LINC00606-201ENST00000412578 RSF1Q96T23 1441 aaPredicted RBP16.79■□□□□ 0.28
LINC00606-201ENST00000412578 BICRAQ9NZM4 1560 aa16.78■□□□□ 0.28
LINC00606-201ENST00000412578 PELP1Q8IZL8 1130 aaKnown RBP16.77■□□□□ 0.28
LINC00606-201ENST00000412578 MROH2BQ7Z745 1585 aa16.72■□□□□ 0.27
LINC00606-201ENST00000412578 BAZ1AQ9NRL2 1556 aaPredicted RBP16.6■□□□□ 0.25
LINC00606-201ENST00000412578 WIZO95785 1651 aa16.57■□□□□ 0.24
LINC00606-201ENST00000412578 SMARCA4P51532 1647 aa16.52■□□□□ 0.24
LINC00606-201ENST00000412578 LOC105371045A0A1W2PR82 267 aa16.48■□□□□ 0.23
LINC00606-201ENST00000412578 PCGF6Q9BYE7 350 aa16.47■□□□□ 0.23
LINC00606-201ENST00000412578 MYT1Q01538 1121 aa16.34■□□□□ 0.21
LINC00606-201ENST00000412578 TRIM41Q8WV44 630 aa16.33■□□□□ 0.2
LINC00606-201ENST00000412578 EIF4G1Q04637 1599 aaKnown RBP16.33■□□□□ 0.2
LINC00606-201ENST00000412578 ATAD2BQ9ULI0 1458 aa16.33■□□□□ 0.2
LINC00606-201ENST00000412578 HRCP23327 699 aa16.32■□□□□ 0.2
LINC00606-201ENST00000412578 TOP2AP11388 1531 aaKnown RBP16.28■□□□□ 0.2
LINC00606-201ENST00000412578 FAM9AQ8IZU1 332 aaPredicted RBP16.28■□□□□ 0.2
LINC00606-201ENST00000412578 BAZ1BQ9UIG0 1483 aaKnown RBP16.27■□□□□ 0.2
LINC00606-201ENST00000412578 CCDC88BA6NC98 1476 aa16.26■□□□□ 0.19
LINC00606-201ENST00000412578 PPARGC1BQ86YN6 1023 aaKnown RBP16.24■□□□□ 0.19
LINC00606-201ENST00000412578 EHMT2Q96KQ7 1210 aa16.24■□□□□ 0.19
LINC00606-201ENST00000412578 SMARCA2P51531 1590 aa16.23■□□□□ 0.19
LINC00606-201ENST00000412578 PEG3Q9GZU2 1588 aa16.18■□□□□ 0.18
LINC00606-201ENST00000412578 NCAPD3P42695 1498 aa16.12■□□□□ 0.17
LINC00606-201ENST00000412578 CC2D2AQ9P2K1 1620 aa16.12■□□□□ 0.17
LINC00606-201ENST00000412578 ABCC8Q09428 1581 aa16.09■□□□□ 0.17
LINC00606-201ENST00000412578 DNAJC5BQ9UF47 199 aa16.05■□□□□ 0.16
LINC00606-201ENST00000412578 HMGXB3Q12766 1538 aa16.01■□□□□ 0.15
LINC00606-201ENST00000412578 TRIM26Q12899 539 aaPredicted RBP15.93■□□□□ 0.14
LINC00606-201ENST00000412578 PRKCSHP14314 528 aaPredicted RBP15.86■□□□□ 0.13
LINC00606-201ENST00000412578 SOGA1O94964 1423 aa15.85■□□□□ 0.13
LINC00606-201ENST00000412578 WRNQ14191 1432 aaPredicted RBP eCLIP15.83■□□□□ 0.13
LINC00606-201ENST00000412578 SCAF1Q9H7N4 1312 aaKnown RBP15.82■□□□□ 0.12
LINC00606-201ENST00000412578 CADPSQ9ULU8 1353 aa15.82■□□□□ 0.12
LINC00606-201ENST00000412578 RUSC2Q8N2Y8 1516 aa15.81■□□□□ 0.12
LINC00606-201ENST00000412578 CFTRP13569 1480 aa15.79■□□□□ 0.12
LINC00606-201ENST00000412578 NESP48681 1621 aa15.78■□□□□ 0.12
LINC00606-201ENST00000412578 SYNJ1O43426 1573 aa15.76■□□□□ 0.11
LINC00606-201ENST00000412578 TTBK1Q5TCY1 1321 aaPredicted RBP15.69■□□□□ 0.1
LINC00606-201ENST00000412578 CEP162Q5TB80 1403 aa15.65■□□□□ 0.1
LINC00606-201ENST00000412578 FANCD2Q9BXW9 1451 aa15.65■□□□□ 0.1
LINC00606-201ENST00000412578 CSRNP3Q8WYN3 585 aa15.64■□□□□ 0.09
LINC00606-201ENST00000412578 CUX1P39880 1505 aa15.6■□□□□ 0.09
LINC00606-201ENST00000412578 EEA1Q15075 1411 aa15.6■□□□□ 0.09
LINC00606-201ENST00000412578 UBTFP17480 764 aaKnown RBP15.59■□□□□ 0.09
LINC00606-201ENST00000412578 BCL11AQ9H165 835 aa15.58■□□□□ 0.08
LINC00606-201ENST00000412578 TNIKQ9UKE5 1360 aa15.57■□□□□ 0.08
LINC00606-201ENST00000412578 GOLGA3Q08378 1498 aa15.56■□□□□ 0.08
LINC00606-201ENST00000412578 TOP2BQ02880 1626 aa15.55■□□□□ 0.08
LINC00606-201ENST00000412578 RANGAP1P46060 587 aaPredicted RBP15.55■□□□□ 0.08
LINC00606-201ENST00000412578 PDS5BQ9NTI5 1447 aa15.55■□□□□ 0.08
LINC00606-201ENST00000412578 LAMC3Q9Y6N6 1575 aa15.53■□□□□ 0.08
LINC00606-201ENST00000412578 CEP164Q9UPV0 1460 aa15.52■□□□□ 0.08
LINC00606-201ENST00000412578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
LINC00606-201ENST00000412578 KIF21BO75037 1637 aa15.49■□□□□ 0.07
LINC00606-201ENST00000412578 ZEB1P37275 1124 aaPredicted RBP15.49■□□□□ 0.07
LINC00606-201ENST00000412578 BIVM-ERCC5R4GMW8 1640 aa15.48■□□□□ 0.07
LINC00606-201ENST00000412578 FGD5Q6ZNL6 1462 aa15.48■□□□□ 0.07
LINC00606-201ENST00000412578 PRDM2Q13029 1718 aa15.47■□□□□ 0.07
LINC00606-201ENST00000412578 RAPGEF2Q9Y4G8 1499 aa15.47■□□□□ 0.07
LINC00606-201ENST00000412578 RAD54L2Q9Y4B4 1467 aa15.45■□□□□ 0.06
LINC00606-201ENST00000412578 TOPBP1Q92547 1522 aa15.44■□□□□ 0.06
LINC00606-201ENST00000412578 CUX2O14529 1486 aa15.44■□□□□ 0.06
LINC00606-201ENST00000412578 ERCC6Q03468 1493 aa15.43■□□□□ 0.06
LINC00606-201ENST00000412578 URB2Q14146 1524 aaKnown RBP15.42■□□□□ 0.06
LINC00606-201ENST00000412578 KIF27Q86VH2 1401 aa15.42■□□□□ 0.06
LINC00606-201ENST00000412578 KIF21AQ7Z4S6 1674 aa15.41■□□□□ 0.06
LINC00606-201ENST00000412578 CCER1Q8TC90 406 aaPredicted RBP15.41■□□□□ 0.06
LINC00606-201ENST00000412578 POLA1P09884 1462 aaPredicted RBP15.39■□□□□ 0.05
LINC00606-201ENST00000412578 CLIP1P30622 1438 aa15.38■□□□□ 0.05
LINC00606-201ENST00000412578 DNMBPQ6XZF7 1577 aa15.38■□□□□ 0.05
LINC00606-201ENST00000412578 TDRD9Q8NDG6 1382 aaKnown RBP15.37■□□□□ 0.05
LINC00606-201ENST00000412578 IGF1RP08069 1367 aa15.32■□□□□ 0.04
LINC00606-201ENST00000412578 MRC2Q9UBG0 1479 aa15.3■□□□□ 0.04
LINC00606-201ENST00000412578 PRXQ9BXM0 1461 aa15.29■□□□□ 0.04
LINC00606-201ENST00000412578 VPS8Q8N3P4 1428 aa15.28■□□□□ 0.04
LINC00606-201ENST00000412578 CARMIL1Q5VZK9 1371 aa15.27■□□□□ 0.03
LINC00606-201ENST00000412578 ERICH3Q5RHP9 1530 aa15.25■□□□□ 0.03
LINC00606-201ENST00000412578 ABCA10Q8WWZ4 1543 aa15.24■□□□□ 0.03
LINC00606-201ENST00000412578 AQRO60306 1485 aaKnown RBP eCLIP15.23■□□□□ 0.03
LINC00606-201ENST00000412578 ARAP1Q96P48 1450 aa15.21■□□□□ 0.02
LINC00606-201ENST00000412578 GAPVD1Q14C86 1478 aa15.19■□□□□ 0.02
LINC00606-201ENST00000412578 P3H3Q8IVL6 736 aa15.17■□□□□ 0.02
LINC00606-201ENST00000412578 ZNF608Q9ULD9 1512 aaPredicted RBP15.16■□□□□ 0.02
LINC00606-201ENST00000412578 HNRNPUL2Q1KMD3 747 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms