Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 AC068418.2-201ENST00000577309 3703 ntBASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 MYCLP2-201ENST00000449268 967 ntBASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 RPL13AP25-201ENST00000484130 612 ntBASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.33□□□□□ -0.12
NUP54Q7Z3B4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 AC023157.3-201ENST00000619086 2088 ntBASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 AC007431.3-201ENST00000623221 587 ntBASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 AC136621.1-201ENST00000624017 2304 ntBASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 AC092850.2-201ENST00000623821 2697 ntBASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP54Q7Z3B4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP54Q7Z3B4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP54Q7Z3B4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.31□□□□□ -0.12
NUP54Q7Z3B4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.31□□□□□ -0.12
NUP54Q7Z3B4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NUP54Q7Z3B4 AC084364.1-201ENST00000551967 1556 ntBASIC14.31□□□□□ -0.12
NUP54Q7Z3B4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NUP54Q7Z3B4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.31□□□□□ -0.12
NUP54Q7Z3B4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP54Q7Z3B4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NUP54Q7Z3B4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
NUP54Q7Z3B4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP54Q7Z3B4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP54Q7Z3B4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NUP54Q7Z3B4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.31□□□□□ -0.12
NUP54Q7Z3B4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NUP54Q7Z3B4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP54Q7Z3B4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP54Q7Z3B4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NUP54Q7Z3B4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms