Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC93Q567U6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC93Q567U6 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC93Q567U6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC93Q567U6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CCDC93Q567U6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC93Q567U6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC93Q567U6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC93Q567U6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC93Q567U6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC93Q567U6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC93Q567U6 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC93Q567U6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC93Q567U6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC93Q567U6 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CCDC93Q567U6 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC93Q567U6 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC93Q567U6 RPL17P11-201ENST00000417593 544 ntBASIC18.84■□□□□ 0.61
CCDC93Q567U6 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC93Q567U6 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 AC007274.2-201ENST00000421675 662 ntBASIC18.84■□□□□ 0.61
CCDC93Q567U6 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 NUP210P1-202ENST00000504322 710 ntBASIC18.84■□□□□ 0.61
CCDC93Q567U6 AL391280.1-201ENST00000506969 1062 ntBASIC18.84■□□□□ 0.61
CCDC93Q567U6 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC93Q567U6 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC93Q567U6 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC93Q567U6 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC93Q567U6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC93Q567U6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC93Q567U6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC93Q567U6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC93Q567U6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC93Q567U6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC93Q567U6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC93Q567U6 AC105917.1-201ENST00000506637 2539 ntBASIC18.83■□□□□ 0.61
CCDC93Q567U6 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC93Q567U6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC93Q567U6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC93Q567U6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC93Q567U6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC93Q567U6 KRT8P29-201ENST00000420409 1371 ntBASIC18.83■□□□□ 0.61
CCDC93Q567U6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC93Q567U6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC93Q567U6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.83■□□□□ 0.61
CCDC93Q567U6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC93Q567U6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC93Q567U6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC93Q567U6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.83■□□□□ 0.61
CCDC93Q567U6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC93Q567U6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC93Q567U6 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC93Q567U6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC93Q567U6 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC93Q567U6 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC93Q567U6 POM121L8P-201ENST00000417732 1281 ntBASIC18.83■□□□□ 0.6
CCDC93Q567U6 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC93Q567U6 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC93Q567U6 POM121L9P-203ENST00000441984 1285 ntBASIC18.83■□□□□ 0.6
CCDC93Q567U6 CHMP1AP1-201ENST00000445563 662 ntBASIC18.83■□□□□ 0.6
CCDC93Q567U6 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CCDC93Q567U6 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC93Q567U6 AC008267.1-201ENST00000474858 1069 ntBASIC18.83■□□□□ 0.6
CCDC93Q567U6 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC93Q567U6 AP003171.2-201ENST00000528208 925 ntBASIC18.83■□□□□ 0.6
CCDC93Q567U6 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC93Q567U6 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC93Q567U6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC93Q567U6 AL133499.1-201ENST00000596207 608 ntBASIC18.83■□□□□ 0.6
CCDC93Q567U6 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC18.83■□□□□ 0.6
CCDC93Q567U6 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC93Q567U6 AL023803.2-201ENST00000620080 638 ntBASIC18.83■□□□□ 0.6
CCDC93Q567U6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC93Q567U6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC93Q567U6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC93Q567U6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCDC93Q567U6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC93Q567U6 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC93Q567U6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC93Q567U6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC93Q567U6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC93Q567U6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms