Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.88□□□□□ -0.19
SCN1BQ07699 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SCN1BQ07699 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
SCN1BQ07699 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SCN1BQ07699 AC023024.2-201ENST00000623561 1993 ntBASIC13.88□□□□□ -0.19
SCN1BQ07699 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SCN1BQ07699 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SCN1BQ07699 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SCN1BQ07699 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.88□□□□□ -0.19
SCN1BQ07699 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.88□□□□□ -0.19
SCN1BQ07699 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SCN1BQ07699 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SCN1BQ07699 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
SCN1BQ07699 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SCN1BQ07699 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SCN1BQ07699 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.87□□□□□ -0.19
SCN1BQ07699 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
SCN1BQ07699 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SCN1BQ07699 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SCN1BQ07699 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.87□□□□□ -0.19
SCN1BQ07699 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
SCN1BQ07699 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.87□□□□□ -0.19
SCN1BQ07699 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SCN1BQ07699 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.87□□□□□ -0.19
SCN1BQ07699 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.87□□□□□ -0.19
SCN1BQ07699 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.87□□□□□ -0.19
SCN1BQ07699 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SCN1BQ07699 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.87□□□□□ -0.19
SCN1BQ07699 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 PMS2P4-201ENST00000412466 1052 ntBASIC13.87□□□□□ -0.19
SCN1BQ07699 IGLL3P-201ENST00000412472 434 ntBASIC13.87□□□□□ -0.19
SCN1BQ07699 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.87□□□□□ -0.19
SCN1BQ07699 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SCN1BQ07699 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.87□□□□□ -0.19
SCN1BQ07699 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.87□□□□□ -0.19
SCN1BQ07699 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SCN1BQ07699 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.87□□□□□ -0.19
SCN1BQ07699 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.87□□□□□ -0.19
SCN1BQ07699 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SCN1BQ07699 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 AC092135.3-201ENST00000624151 1846 ntBASIC13.87□□□□□ -0.19
SCN1BQ07699 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.87□□□□□ -0.19
SCN1BQ07699 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
SCN1BQ07699 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SCN1BQ07699 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SCN1BQ07699 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SCN1BQ07699 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SCN1BQ07699 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SCN1BQ07699 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SCN1BQ07699 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.86□□□□□ -0.19
SCN1BQ07699 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SCN1BQ07699 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SCN1BQ07699 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SCN1BQ07699 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SCN1BQ07699 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SCN1BQ07699 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SCN1BQ07699 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SCN1BQ07699 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SCN1BQ07699 TCAF1P1-201ENST00000414990 2232 ntBASIC13.86□□□□□ -0.19
SCN1BQ07699 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.86□□□□□ -0.19
SCN1BQ07699 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.86□□□□□ -0.19
SCN1BQ07699 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SCN1BQ07699 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SCN1BQ07699 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SCN1BQ07699 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SCN1BQ07699 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SCN1BQ07699 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms