Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDKN2DP55273 AC004890.2-204ENST00000481968 304 ntBASIC15.27■□□□□ 0.04
CDKN2DP55273 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.27■□□□□ 0.04
CDKN2DP55273 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.27■□□□□ 0.04
CDKN2DP55273 AC106028.4-201ENST00000614509 607 ntBASIC15.27■□□□□ 0.04
CDKN2DP55273 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDKN2DP55273 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKN2DP55273 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKN2DP55273 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKN2DP55273 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKN2DP55273 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKN2DP55273 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKN2DP55273 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDKN2DP55273 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.27■□□□□ 0.03
CDKN2DP55273 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CDKN2DP55273 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.27■□□□□ 0.03
CDKN2DP55273 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKN2DP55273 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDKN2DP55273 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKN2DP55273 AC007686.3-201ENST00000619017 3487 ntBASIC15.27■□□□□ 0.03
CDKN2DP55273 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKN2DP55273 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKN2DP55273 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.27■□□□□ 0.03
CDKN2DP55273 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.27■□□□□ 0.03
CDKN2DP55273 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.27■□□□□ 0.03
CDKN2DP55273 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.26■□□□□ 0.03
CDKN2DP55273 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKN2DP55273 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
CDKN2DP55273 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.26■□□□□ 0.03
CDKN2DP55273 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKN2DP55273 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CDKN2DP55273 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
CDKN2DP55273 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKN2DP55273 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKN2DP55273 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKN2DP55273 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.26■□□□□ 0.03
CDKN2DP55273 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKN2DP55273 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.26■□□□□ 0.03
CDKN2DP55273 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKN2DP55273 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDKN2DP55273 LINC00552-201ENST00000625151 2579 ntBASIC15.26■□□□□ 0.03
CDKN2DP55273 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKN2DP55273 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.26■□□□□ 0.03
CDKN2DP55273 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.26■□□□□ 0.03
CDKN2DP55273 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.26■□□□□ 0.03
CDKN2DP55273 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.26■□□□□ 0.03
CDKN2DP55273 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.26■□□□□ 0.03
CDKN2DP55273 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.26■□□□□ 0.03
CDKN2DP55273 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.26■□□□□ 0.03
CDKN2DP55273 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.26■□□□□ 0.03
CDKN2DP55273 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.26■□□□□ 0.03
CDKN2DP55273 AC135586.1-201ENST00000539323 574 ntBASIC15.26■□□□□ 0.03
CDKN2DP55273 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKN2DP55273 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.26■□□□□ 0.03
CDKN2DP55273 AL391069.4-201ENST00000609583 481 ntBASIC15.26■□□□□ 0.03
CDKN2DP55273 AC004790.1-201ENST00000612686 536 ntBASIC15.26■□□□□ 0.03
CDKN2DP55273 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.26■□□□□ 0.03
CDKN2DP55273 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.26■□□□□ 0.03
CDKN2DP55273 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKN2DP55273 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKN2DP55273 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKN2DP55273 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKN2DP55273 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKN2DP55273 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.26■□□□□ 0.03
CDKN2DP55273 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKN2DP55273 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKN2DP55273 CLK3P2-201ENST00000427566 1453 ntBASIC15.26■□□□□ 0.03
CDKN2DP55273 BTBD7P1-201ENST00000447253 1453 ntBASIC15.26■□□□□ 0.03
CDKN2DP55273 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.26■□□□□ 0.03
CDKN2DP55273 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.26■□□□□ 0.03
CDKN2DP55273 AC012508.2-201ENST00000567613 1472 ntBASIC15.26■□□□□ 0.03
CDKN2DP55273 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CDKN2DP55273 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDKN2DP55273 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKN2DP55273 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDKN2DP55273 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKN2DP55273 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDKN2DP55273 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.25■□□□□ 0.03
CDKN2DP55273 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDKN2DP55273 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDKN2DP55273 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDKN2DP55273 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKN2DP55273 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKN2DP55273 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDKN2DP55273 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.25■□□□□ 0.03
CDKN2DP55273 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.25■□□□□ 0.03
CDKN2DP55273 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.25■□□□□ 0.03
CDKN2DP55273 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKN2DP55273 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDKN2DP55273 CICP14-201ENST00000629111 2732 ntBASIC15.25■□□□□ 0.03
CDKN2DP55273 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKN2DP55273 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKN2DP55273 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKN2DP55273 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.25■□□□□ 0.03
CDKN2DP55273 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKN2DP55273 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKN2DP55273 AC022144.1-201ENST00000602255 1580 ntBASIC15.25■□□□□ 0.03
CDKN2DP55273 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDKN2DP55273 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.25■□□□□ 0.03
CDKN2DP55273 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms