Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CEACAM3P40198 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CEACAM3P40198 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.67□□□□□ -0.38
CEACAM3P40198 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CEACAM3P40198 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CEACAM3P40198 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.67□□□□□ -0.38
CEACAM3P40198 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.67□□□□□ -0.38
CEACAM3P40198 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
CEACAM3P40198 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.67□□□□□ -0.38
CEACAM3P40198 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.67□□□□□ -0.38
CEACAM3P40198 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.67□□□□□ -0.38
CEACAM3P40198 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.67□□□□□ -0.38
CEACAM3P40198 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.67□□□□□ -0.38
CEACAM3P40198 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.67□□□□□ -0.38
CEACAM3P40198 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.67□□□□□ -0.38
CEACAM3P40198 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.67□□□□□ -0.38
CEACAM3P40198 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.67□□□□□ -0.38
CEACAM3P40198 LINC02560-201ENST00000596379 459 ntBASIC12.67□□□□□ -0.38
CEACAM3P40198 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.67□□□□□ -0.38
CEACAM3P40198 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CEACAM3P40198 PAUPAR-201ENST00000630360 2965 ntBASIC12.67□□□□□ -0.38
CEACAM3P40198 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CEACAM3P40198 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.67□□□□□ -0.38
CEACAM3P40198 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.67□□□□□ -0.38
CEACAM3P40198 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.66□□□□□ -0.38
CEACAM3P40198 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.66□□□□□ -0.38
CEACAM3P40198 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.66□□□□□ -0.38
CEACAM3P40198 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.66□□□□□ -0.38
CEACAM3P40198 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
CEACAM3P40198 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CEACAM3P40198 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.66□□□□□ -0.38
CEACAM3P40198 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CEACAM3P40198 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CEACAM3P40198 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.66□□□□□ -0.38
CEACAM3P40198 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.66□□□□□ -0.38
CEACAM3P40198 AL353779.1-201ENST00000434793 351 ntBASIC12.66□□□□□ -0.38
CEACAM3P40198 KRT18P64-201ENST00000434946 1219 ntBASIC12.66□□□□□ -0.38
CEACAM3P40198 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.66□□□□□ -0.38
CEACAM3P40198 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.66□□□□□ -0.38
CEACAM3P40198 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.66□□□□□ -0.38
CEACAM3P40198 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.66□□□□□ -0.38
CEACAM3P40198 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.66□□□□□ -0.38
CEACAM3P40198 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.66□□□□□ -0.38
CEACAM3P40198 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.66□□□□□ -0.38
CEACAM3P40198 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.66□□□□□ -0.38
CEACAM3P40198 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.66□□□□□ -0.38
CEACAM3P40198 AC099568.2-201ENST00000609194 695 ntBASIC12.66□□□□□ -0.38
CEACAM3P40198 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.66□□□□□ -0.38
CEACAM3P40198 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.66□□□□□ -0.38
CEACAM3P40198 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.66□□□□□ -0.38
CEACAM3P40198 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.66□□□□□ -0.38
CEACAM3P40198 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CEACAM3P40198 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.66□□□□□ -0.38
CEACAM3P40198 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.66□□□□□ -0.38
CEACAM3P40198 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CEACAM3P40198 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CEACAM3P40198 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms