Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-AP01891 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.15□□□□□ -0.3
HLA-AP01891 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
HLA-AP01891 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-AP01891 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-AP01891 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-AP01891 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
HLA-AP01891 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.31
HLA-AP01891 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 HLA-A-201ENST00000376802 1334 ntBASIC13.14□□□□□ -0.31
HLA-AP01891 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
HLA-AP01891 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.14□□□□□ -0.31
HLA-AP01891 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.14□□□□□ -0.31
HLA-AP01891 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.14□□□□□ -0.31
HLA-AP01891 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
HLA-AP01891 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HLA-AP01891 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HLA-AP01891 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.14□□□□□ -0.31
HLA-AP01891 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.14□□□□□ -0.31
HLA-AP01891 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.14□□□□□ -0.31
HLA-AP01891 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.14□□□□□ -0.31
HLA-AP01891 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.14□□□□□ -0.31
HLA-AP01891 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.14□□□□□ -0.31
HLA-AP01891 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.14□□□□□ -0.31
HLA-AP01891 AC243562.2-201ENST00000561247 970 ntBASIC13.14□□□□□ -0.31
HLA-AP01891 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.14□□□□□ -0.31
HLA-AP01891 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.14□□□□□ -0.31
HLA-AP01891 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HLA-AP01891 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.14□□□□□ -0.31
HLA-AP01891 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.14□□□□□ -0.31
HLA-AP01891 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.14□□□□□ -0.31
HLA-AP01891 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.14□□□□□ -0.31
HLA-AP01891 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.14□□□□□ -0.31
HLA-AP01891 AC116407.3-201ENST00000623905 1129 ntBASIC13.14□□□□□ -0.31
HLA-AP01891 AC117500.6-201ENST00000624871 588 ntBASIC13.14□□□□□ -0.31
HLA-AP01891 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HLA-AP01891 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HLA-AP01891 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
HLA-AP01891 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 ACE3P-201ENST00000423435 1973 ntBASIC13.14□□□□□ -0.31
HLA-AP01891 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HLA-AP01891 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-AP01891 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
HLA-AP01891 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HLA-AP01891 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HLA-AP01891 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.13□□□□□ -0.31
HLA-AP01891 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HLA-AP01891 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HLA-AP01891 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
HLA-AP01891 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 MTHFR-210ENST00000641407 2387 ntBASIC13.13□□□□□ -0.31
HLA-AP01891 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.13□□□□□ -0.31
HLA-AP01891 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.13□□□□□ -0.31
HLA-AP01891 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
HLA-AP01891 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.13□□□□□ -0.31
HLA-AP01891 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 GPX1P2-201ENST00000429271 606 ntBASIC13.13□□□□□ -0.31
HLA-AP01891 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.13□□□□□ -0.31
HLA-AP01891 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
HLA-AP01891 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.13□□□□□ -0.31
HLA-AP01891 KRT18P34-201ENST00000488218 1270 ntBASIC13.13□□□□□ -0.31
HLA-AP01891 AC093909.1-201ENST00000504731 1122 ntBASIC13.13□□□□□ -0.31
HLA-AP01891 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms