Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CLIC1O00299 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.63□□□□□ -0.07
CLIC1O00299 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
CLIC1O00299 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.63□□□□□ -0.07
CLIC1O00299 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CLIC1O00299 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.63□□□□□ -0.07
CLIC1O00299 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 AC140479.7-201ENST00000636301 2332 ntBASIC14.63□□□□□ -0.07
CLIC1O00299 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.63□□□□□ -0.07
CLIC1O00299 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.62□□□□□ -0.07
CLIC1O00299 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLIC1O00299 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.62□□□□□ -0.07
CLIC1O00299 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLIC1O00299 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLIC1O00299 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLIC1O00299 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CLIC1O00299 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLIC1O00299 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.62□□□□□ -0.07
CLIC1O00299 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.62□□□□□ -0.07
CLIC1O00299 SPDYE14P-201ENST00000442619 822 ntBASIC14.62□□□□□ -0.07
CLIC1O00299 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.62□□□□□ -0.07
CLIC1O00299 SLED1-202ENST00000512051 380 ntBASIC14.62□□□□□ -0.07
CLIC1O00299 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLIC1O00299 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CLIC1O00299 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.62□□□□□ -0.07
CLIC1O00299 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.62□□□□□ -0.07
CLIC1O00299 AC026150.2-201ENST00000564693 1156 ntBASIC14.62□□□□□ -0.07
CLIC1O00299 AC015910.1-201ENST00000579400 975 ntBASIC14.62□□□□□ -0.07
CLIC1O00299 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.62□□□□□ -0.07
CLIC1O00299 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLIC1O00299 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CLIC1O00299 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CLIC1O00299 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
CLIC1O00299 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
CLIC1O00299 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.62□□□□□ -0.07
CLIC1O00299 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLIC1O00299 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CLIC1O00299 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLIC1O00299 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLIC1O00299 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLIC1O00299 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.62□□□□□ -0.07
CLIC1O00299 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLIC1O00299 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CLIC1O00299 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CLIC1O00299 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.62□□□□□ -0.07
CLIC1O00299 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.62□□□□□ -0.07
CLIC1O00299 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.61□□□□□ -0.07
CLIC1O00299 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.61□□□□□ -0.07
CLIC1O00299 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CLIC1O00299 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.61□□□□□ -0.07
CLIC1O00299 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CLIC1O00299 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
CLIC1O00299 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CLIC1O00299 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CLIC1O00299 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CLIC1O00299 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.61□□□□□ -0.07
CLIC1O00299 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CLIC1O00299 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.61□□□□□ -0.07
CLIC1O00299 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CLIC1O00299 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 AL022342.1-201ENST00000400363 863 ntBASIC14.61□□□□□ -0.07
CLIC1O00299 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 AC074338.1-201ENST00000416825 156 ntBASIC14.61□□□□□ -0.07
CLIC1O00299 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.61□□□□□ -0.07
CLIC1O00299 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.61□□□□□ -0.07
CLIC1O00299 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.61□□□□□ -0.07
CLIC1O00299 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.61□□□□□ -0.07
CLIC1O00299 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.61□□□□□ -0.07
CLIC1O00299 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.61□□□□□ -0.07
CLIC1O00299 AL079307.3-201ENST00000556114 283 ntBASIC14.61□□□□□ -0.07
CLIC1O00299 MIR4469-201ENST00000583919 79 ntBASIC14.61□□□□□ -0.07
CLIC1O00299 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.61□□□□□ -0.07
CLIC1O00299 MIR6069-201ENST00000620069 79 ntBASIC14.61□□□□□ -0.07
CLIC1O00299 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.61□□□□□ -0.07
CLIC1O00299 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.61□□□□□ -0.07
CLIC1O00299 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.61□□□□□ -0.07
CLIC1O00299 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLIC1O00299 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms