Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.58■□□□□ 0.41
TMEM88BA6NKF7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM88BA6NKF7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TMEM88BA6NKF7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.58■□□□□ 0.41
TMEM88BA6NKF7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM88BA6NKF7 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM88BA6NKF7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.58■□□□□ 0.41
TMEM88BA6NKF7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM88BA6NKF7 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC17.58■□□□□ 0.41
TMEM88BA6NKF7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM88BA6NKF7 OR6D1P-202ENST00000641007 5290 ntBASIC17.58■□□□□ 0.41
TMEM88BA6NKF7 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM88BA6NKF7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 AL645933.1-201ENST00000440087 609 ntBASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 AC233280.19-201ENST00000633223 136 ntBASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 AL645728.2-202ENST00000641679 227 ntBASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM88BA6NKF7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 AC005052.1-201ENST00000625181 2492 ntBASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 HLA-DMA-203ENST00000395305 777 ntBASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 AP005212.2-201ENST00000584979 510 ntBASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 AC005041.3-201ENST00000606287 649 ntBASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 AC138696.2-201ENST00000607376 223 ntBASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 MIR6720-201ENST00000611664 98 ntBASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 AC011471.3-201ENST00000623576 402 ntBASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM88BA6NKF7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 LINC01815-202ENST00000641468 1409 ntBASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 AC006058.4-201ENST00000624016 1670 ntBASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 TSPY25P-201ENST00000429463 745 ntBASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 HLA-K-203ENST00000430151 1046 ntBASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM88BA6NKF7 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms