Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 RARRES2P8-201ENST00000566335 367 ntBASIC13.49□□□□□ -0.25
SHISA3A0PJX4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 AC116407.3-201ENST00000623905 1129 ntBASIC13.49□□□□□ -0.25
SHISA3A0PJX4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHISA3A0PJX4 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 AC023090.2-201ENST00000625182 2110 ntBASIC13.48□□□□□ -0.25
SHISA3A0PJX4 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 FAAHP1-202ENST00000446499 1238 ntBASIC13.48□□□□□ -0.25
SHISA3A0PJX4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 AC068137.2-201ENST00000605408 478 ntBASIC13.48□□□□□ -0.25
SHISA3A0PJX4 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.48□□□□□ -0.25
SHISA3A0PJX4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 KRT18P2-201ENST00000447938 1258 ntBASIC13.47□□□□□ -0.25
SHISA3A0PJX4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.47□□□□□ -0.25
SHISA3A0PJX4 IGHV3-22-201ENST00000520721 359 ntBASIC13.47□□□□□ -0.25
SHISA3A0PJX4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 259.5 ms