Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
IFT52Q9Y366 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
IFT52Q9Y366 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFT52Q9Y366 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFT52Q9Y366 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
IFT52Q9Y366 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IFT52Q9Y366 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
IFT52Q9Y366 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IFT52Q9Y366 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.58□□□□□ -0.08
IFT52Q9Y366 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFT52Q9Y366 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFT52Q9Y366 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.58□□□□□ -0.08
IFT52Q9Y366 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFT52Q9Y366 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.58□□□□□ -0.08
IFT52Q9Y366 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.58□□□□□ -0.08
IFT52Q9Y366 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.58□□□□□ -0.08
IFT52Q9Y366 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.58□□□□□ -0.08
IFT52Q9Y366 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.58□□□□□ -0.08
IFT52Q9Y366 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.58□□□□□ -0.08
IFT52Q9Y366 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
IFT52Q9Y366 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.58□□□□□ -0.08
IFT52Q9Y366 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.58□□□□□ -0.08
IFT52Q9Y366 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.58□□□□□ -0.08
IFT52Q9Y366 RN7SL828P-201ENST00000607615 303 ntBASIC14.58□□□□□ -0.08
IFT52Q9Y366 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.58□□□□□ -0.08
IFT52Q9Y366 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFT52Q9Y366 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
IFT52Q9Y366 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFT52Q9Y366 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFT52Q9Y366 LINC00552-201ENST00000625151 2579 ntBASIC14.58□□□□□ -0.08
IFT52Q9Y366 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFT52Q9Y366 KRT8P44-201ENST00000441609 1350 ntBASIC14.58□□□□□ -0.08
IFT52Q9Y366 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFT52Q9Y366 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.58□□□□□ -0.08
IFT52Q9Y366 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
IFT52Q9Y366 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IFT52Q9Y366 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFT52Q9Y366 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFT52Q9Y366 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
IFT52Q9Y366 AC232323.1-201ENST00000540724 2099 ntBASIC14.57□□□□□ -0.08
IFT52Q9Y366 REXO1L5P-201ENST00000622260 2098 ntBASIC14.57□□□□□ -0.08
IFT52Q9Y366 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 AL607033.1-201ENST00000623900 1599 ntBASIC14.57□□□□□ -0.08
IFT52Q9Y366 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 BANF1P1-201ENST00000553684 263 ntBASIC14.57□□□□□ -0.08
IFT52Q9Y366 AC093520.2-201ENST00000561830 333 ntBASIC14.57□□□□□ -0.08
IFT52Q9Y366 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 AC013726.1-201ENST00000563747 2285 ntBASIC14.57□□□□□ -0.08
IFT52Q9Y366 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
IFT52Q9Y366 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFT52Q9Y366 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFT52Q9Y366 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.56□□□□□ -0.08
IFT52Q9Y366 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFT52Q9Y366 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFT52Q9Y366 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IFT52Q9Y366 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
IFT52Q9Y366 AL390755.1-201ENST00000623716 2027 ntBASIC14.56□□□□□ -0.08
IFT52Q9Y366 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms