Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AC055811.4-201ENST00000624039 1754 ntBASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC10Q9NYD6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 TNRC18P3-201ENST00000441896 2691 ntBASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 CHMP1AP1-201ENST00000445563 662 ntBASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 AC106820.3-201ENST00000561653 397 ntBASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HOXC10Q9NYD6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 MESTP3-201ENST00000503460 968 ntBASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 AL451050.2-201ENST00000606967 682 ntBASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 AC138466.3-201ENST00000619983 221 ntBASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXC10Q9NYD6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 AL662890.1-201ENST00000396818 632 ntBASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 AL136309.1-201ENST00000403917 691 ntBASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 RHOQP1-201ENST00000555758 579 ntBASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms