Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 AC011474.4-201ENST00000623523 2076 ntBASIC14.18□□□□□ -0.14
HMG20AQ9NP66 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 AC129492.6-201ENST00000611383 1305 ntBASIC14.17□□□□□ -0.14
HMG20AQ9NP66 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 EMBP1-201ENST00000458200 901 ntBASIC14.17□□□□□ -0.14
HMG20AQ9NP66 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 AC107918.2-201ENST00000530817 355 ntBASIC14.17□□□□□ -0.14
HMG20AQ9NP66 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 AL121912.1-201ENST00000603683 238 ntBASIC14.17□□□□□ -0.14
HMG20AQ9NP66 AC008667.4-201ENST00000607370 168 ntBASIC14.17□□□□□ -0.14
HMG20AQ9NP66 AC008735.5-201ENST00000623544 497 ntBASIC14.17□□□□□ -0.14
HMG20AQ9NP66 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMG20AQ9NP66 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.16□□□□□ -0.14
HMG20AQ9NP66 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 PMS2P1-201ENST00000431037 1228 ntBASIC14.16□□□□□ -0.14
HMG20AQ9NP66 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 FAM197Y8-203ENST00000450145 560 ntBASIC14.16□□□□□ -0.14
HMG20AQ9NP66 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 AC105339.3-201ENST00000560043 636 ntBASIC14.16□□□□□ -0.14
HMG20AQ9NP66 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 TP73-AS1-207ENST00000624167 988 ntBASIC14.16□□□□□ -0.14
HMG20AQ9NP66 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms